Gene BamMC406_5190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5190 
Symbol 
ID6179463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2387389 
End bp2388510 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content70% 
IMG OID641684946 
Product2-aminoethylphosphonate--pyruvate transaminase 
Protein accessionYP_001811851 
Protein GI172064200 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID[TIGR02326] 2-aminoethylphosphonate--pyruvate transaminase
[TIGR03301] 2-aminoethylphosphonate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC CGATTCTGCT CACGCCCGGC CCGCTCACCA CATCCGCCAC AACACGCCAC 
GCAATGCAAC ATGACTGGGG CTCGTGGGAC GCCGCTTTCA ATCAGTTGAC GGCCAGCGTC
TGCGCGGACC TCGTCGCGAT CGCGCGCGGC GGCGACGAGT ACGTGTGCGT GCCGATGCAA
GGCAGCGGCA CCTTTTCGGT CGAGGCCGCG CTCGGCACGC TGGTGCCGCG CGACGGCGTC
GTGCTGGTGC CCGACAACGG CGCGTATTGC GCGCGCATCC TGAAGATCCT CGGCCGGCTC
GGCGTCGAAG CGATCGCGTT GCCGTTCGGC GAGGACGCAG CGGTCGACCC GGCGGCGGTG
GAAGCCGCGT TCGCGCGCGA GCCGCGCATC ACGCATGTCG CGCTGGTGCA CCTGGAAACG
AGCGCCGGCA TCCTGAATCC GCTCGACGCG ATCGCGGCCA TGTGCCGGCA GCACGGCAGG
CGGCTGATCG TCGACGCGAT GAGTTCGTTC GGCGCGCTGC CGATCGCGCT GGCGGACAGC
GGGATCGACG CACTGGTGTC GGCGAGCGGC AAATGCCTGG AAGGCGTGCC GGGGATGGGG
TTCGCGATCG TGCGGCGCGA CGCGCTCGAT GCATGCGAAG GCAACTCGCC GTCGCTCGCG
CTCGACCTCC AGGATCAGCA CGCGTACCTG CGCAAGACGG GCCAGTGGCG CTTCACGCCG
CCGACCCACG TGATCGCCGC GCTGCGCGCG GCGCTCGACC AGTATCTCGC CGAAGGCGGC
CAGCCCGCAC GTGGCGCACG CTATGCGGAG AATTGCCGGA CGCTGGTCGA ATCGATGCGC
GCGCTCGGCT TCGCGCCGTT CCTCGACGCC AGCGTGCAGG CGCCCGTGAT CGTCACGTTC
CATGCGCCCG ACCATCCCGC GTACGATTTC CGCCGCTTTT ACGACGCGGT GCGCGACGCG
GGCTTCATCC TGTATCCGGG CAAGCTGACG AAAGTGGAGA CTTTCCGCGT CGGCTGCATC
GGCGCGATCG ATGCCGGCGA CATCCGCCGC GCGGTCGCGG CGATCGCGCA GGCGCTCGAA
TCGCTCGGGA TTGCCATGCA GCGCGTGAGC GCGGATGCGT GA
 
Protein sequence
MPDPILLTPG PLTTSATTRH AMQHDWGSWD AAFNQLTASV CADLVAIARG GDEYVCVPMQ 
GSGTFSVEAA LGTLVPRDGV VLVPDNGAYC ARILKILGRL GVEAIALPFG EDAAVDPAAV
EAAFAREPRI THVALVHLET SAGILNPLDA IAAMCRQHGR RLIVDAMSSF GALPIALADS
GIDALVSASG KCLEGVPGMG FAIVRRDALD ACEGNSPSLA LDLQDQHAYL RKTGQWRFTP
PTHVIAALRA ALDQYLAEGG QPARGARYAE NCRTLVESMR ALGFAPFLDA SVQAPVIVTF
HAPDHPAYDF RRFYDAVRDA GFILYPGKLT KVETFRVGCI GAIDAGDIRR AVAAIAQALE
SLGIAMQRVS ADA