Gene BamMC406_5179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5179 
Symbol 
ID6181324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2368115 
End bp2368702 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content72% 
IMG OID641684930 
Productphosphoglycerate mutase 
Protein accessionYP_001811840 
Protein GI172064189 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.341682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAC CTGCCTCGCT GCGCCTGATC GCGCACGCGC CGACCCGCGC GATGCGCACC 
GGCGCGTTTC CCGCCGACGA TCCGCTCGAT GCGCCCGGGC TCGCGGAGGC TGCCGCGCTG
CGCGAGCGGT TCGCAGGCGC CCCCGGCGCG ATCGTGCTGT GCAGCCCCGC ACGGTGCGCG
CGGCAGACCG CCGACGCGCT CGGGCTGCAC GCGGCCATTG ACGATGCGCT GCGCGATGTC
GACTACGGCC ACTGGCACGG CAAGCGGCTG CACGACCTCG CGCGCGACGT GCCGGACGAA
CTCGGCGCGT GGCTCGACGA TCCGGCCGCG TCGCCGCACG GCGGTGAATC GTTCGAAGAC
GTCGCGCGCC GCGTCGGCGC ATGGCTCAGC GCATTGCCAT GTAACCGAGA TATCGTCGCG
ATCACGCATG CGGCGATCGT GCGTGCGGCC ATCGCGCACG GGCGCCGGAT GGACGCGAAG
GCGGCGACCC GCATCGACGT CGCACCGCTG TCGTGCACGG TATTCGCCGC GTCGGGAGAT
GGCTGGACGT CGATCACGGA CGACGTTCGA CGCGATGCCG ATGCGTAA
 
Protein sequence
MTPPASLRLI AHAPTRAMRT GAFPADDPLD APGLAEAAAL RERFAGAPGA IVLCSPARCA 
RQTADALGLH AAIDDALRDV DYGHWHGKRL HDLARDVPDE LGAWLDDPAA SPHGGESFED
VARRVGAWLS ALPCNRDIVA ITHAAIVRAA IAHGRRMDAK AATRIDVAPL SCTVFAASGD
GWTSITDDVR RDADA