Gene BamMC406_5139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5139 
Symbol 
ID6179497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2312820 
End bp2313356 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID641684891 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001811801 
Protein GI172064150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.124755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG ACGCGCCGCC CCGCTCCGGC TTCGACGGCC TGTCGCTCCG GCAACTCGAA 
CGCACGGATC TCGACGCGTG GTACGCGTAC CTGTCGAACC CCGAGGTCAT CCGCCACACG
AGCTGGAACC TGCGTTCGCG CAACGACCTG CTGCCGCTGT TCGACGGCAT CGATTCGGCC
CAACCGGATT CGATCCGCCG GCTCGCGATC GTCGATGATG CATCGGGCGC GCTCGCCGGG
ACGATCGGGC TGCATACGGT GTCCACCGCG AACCGCTCGG CCGAGATCGC GTACGACCTC
GCGCCGTCGC ACTGGGGGCG CGGCATCGCG AGCGCGGTGT GCGCGAGCGT GACCGCGTGG
GCGTTCGCCG AAGGCGGCTT CATGCGCATC CAGGGCGTCG TGCTGACCAG CAACGCCGGC
TCCGCGGGCG TGCTGCAGAA ATGCGGCTAC CGGTACGAGG GATTGCTGCG CGCCTACCGG
ATGGTGCGCG GCGTGCCAGG CGATTTCGCG ATGTACGCGC GCATCGCGAC CGACTGA
 
Protein sequence
MRIDAPPRSG FDGLSLRQLE RTDLDAWYAY LSNPEVIRHT SWNLRSRNDL LPLFDGIDSA 
QPDSIRRLAI VDDASGALAG TIGLHTVSTA NRSAEIAYDL APSHWGRGIA SAVCASVTAW
AFAEGGFMRI QGVVLTSNAG SAGVLQKCGY RYEGLLRAYR MVRGVPGDFA MYARIATD