| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5128 |
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| Symbol | |
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| ID | 6180407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2298084 |
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| End bp | 2299178 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684880 |
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| Product | outer membrane protein (porin) |
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| Protein accession | YP_001811790 |
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| Protein GI | 172064139 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA AACTGGGCGT CGCGCTCGCG ACGGCGATGG CGCTGGCCGG ACCGGCCTGC
GCGCAAAGCA GCGTCACGCT GTACGGGATC ATCGATACCG GTGTGTCCTA CTACAACAAC
GCCGCGCACG GCGGGTCGTT CACCGGGATG CCGACGCTGA CCGGCGAGGT TCCGTCACGC
TGGGGCCTCA GAGGCACGGA GGATCTCGGC GGCGGCTATC AGGCCTTCTT CGTGCTCGAA
AACGGCTTCC AGCCCGGCAC CGGCGCATTG AACTATGGCG GCCGCCTGTT CGGGCGGCAG
GCGAACGTGG GCGTGAACAG TCCGTTCGGC GCGCTGACCC TCGGCCGCCA GATGAACATG
ACGATGATCG TGCTGACCAA TGCCGACGTG ATCGGCCCGT CGATTCATTC GATGGCGGAT
TTCGACTCCT ACCTGCCGAA CTCGCGCAGC GACAATGCGA TCGGCTACAA GGGCACGTTC
CACGGCGTGA CGCTCGGCGC GACCTACAGC TTCGGCCGCG ACGCGGCCGG CCCGGCGGGA
CCGTCGGCGA CGGGCTGCGC CGGCCAGGTG CCCGGCGACA TCGTCGCCTG CCGGCAATAC
ACGGCGATGC TCGCCTATGA CGCGAGCAAT TTCGGGCTGG CCGCCTCGCA CGACGTGATG
CGCGGCGGCG GCGGCGCGCT CGCGCCGCTG AACAATTCGG CGTACACCGA CACGCGCGAC
ATCGTCGCCG GCTACGTGAA GATCGGCCCG GCGAAACTCG GCGCCGGCTG GATCCGCCGC
AATCTCGCGG CGGCCGCACA CCTGCAGGCC GACATCGTGT TCGCGGGCGG CACGTATTAC
GCAACGCCGT ACCTCGCGCT CGACCTGCAG GGCGTGCGCT ACCTGCAGCG TCGCGAAAAC
AGCCAAGGCG GCACGAACGC CACGCTGCTC GTCGGCCGCG CGAACTATTT CCTGTCCAAG
CGGACGACCG TCTATACGTC GGTGGGCTAC ATGTTCAACA GCGCCACCGC CGCCAATGCG
GTGGCCGCCG GCGGCACCGT CGCGACAGGC AGCAACCAGC TCGGCGTCAT GGCCGGGATT
CAGCAGAAAT TCTGA
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| Protein sequence | MKTKLGVALA TAMALAGPAC AQSSVTLYGI IDTGVSYYNN AAHGGSFTGM PTLTGEVPSR
WGLRGTEDLG GGYQAFFVLE NGFQPGTGAL NYGGRLFGRQ ANVGVNSPFG ALTLGRQMNM
TMIVLTNADV IGPSIHSMAD FDSYLPNSRS DNAIGYKGTF HGVTLGATYS FGRDAAGPAG
PSATGCAGQV PGDIVACRQY TAMLAYDASN FGLAASHDVM RGGGGALAPL NNSAYTDTRD
IVAGYVKIGP AKLGAGWIRR NLAAAAHLQA DIVFAGGTYY ATPYLALDLQ GVRYLQRREN
SQGGTNATLL VGRANYFLSK RTTVYTSVGY MFNSATAANA VAAGGTVATG SNQLGVMAGI
QQKF
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