| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5124 |
|---|
| Symbol | |
|---|
| ID | 6179883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 2293358 |
|---|
| End bp | 2294437 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641684876 |
|---|
| Product | vanillate monooxygenase |
|---|
| Protein accession | YP_001811786 |
|---|
| Protein GI | 172064135 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.14115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCTCA AGAACGCTTG GTACGTAGCC TGCACGCCCG ATGAAATCGA CGGCAAGCCG
CTGGGCCGCA AGATCTGCAA CGAGCCGATG GTGTTTTACC GCGCGGCGGA CGGCCAGGTC
GCCGCACTCG AGGACTTCTG CCCGCACCGC GGCGCGCCGC TGTCGCTGGG GTTCGTGCGC
GACGGCGTGC TCGTGTGCGG CTATCACGGG CTGGAAATGG GCTGCAACGG CAAGGCGACC
GGCATGCCGG GCCAGCGGGT CGGCGGCTTC CCGCCGATTC GCAGCTTCCC CGTCGTCGAA
CGGTACGGCT TCATCTGGGT GTGGCCGGGC GATGCGTCCG AAGCCGATCC CGCCCGGCTG
CCCGCGCTGT CGTGGGCCGA GGATCCGGCC TGGGCGCACG GCGGCGGCCT GTATCACATC
CGCTGCGACT ACCGGCTGAT GATCGACAAC CTGATGGACC TCACGCACGA AACGTACGTG
CATGCGACGA GCATCGGCCA GAAGGAAATC GACGAAGCGC CGCCGAAGAC GACCGCCAAC
GGCGACGAAG TCGTCACGAG CCGCTTCATG CAGAACGTGA TGCCTCCGCC GTTCTGGCGG
ATGGCGCTGC GCGGCAACGG GCTGGCCGAC GACGTGCCGG TCGACCGCTG GCAGATCTGC
CGCTTCACGC CGCCGAGCCA CGTGATGATC GAAGTGGGCG TCGCGCATGC GGGCCACGGC
GGCTACGACG CGCCGGCCGA GCTGAAGGCC TCGTCGATCG TGGTCGACTT CATCACGCCC
GAGACGGACA CCTCGATCTG GTACTTCTGG GGGATGGCGC GCAACTTCCG GCCCGACGAT
CACGCGCTGA CCGCCGAGAT CCGCGAGGGC CAGGGCAAGA TCTTCGCCGA GGATCTCGAG
ATGCTCGAGC GCCAGCAGCT CAACCTCGAG CAGTGGCCCG ACCGCAAGCT GCTCAAGCTG
AACATCGACG CCGGCGGCGT GCTGTCGCGC AAGGTGATCG AGCGGCTGCT CGCCGCCGAA
CAGGCGTCGA GCCCGCAGCG CCCCGTGATT CCGGTCGCGC AGATCAAGGA GGCGTCATGA
|
|---|
| Protein sequence | MFLKNAWYVA CTPDEIDGKP LGRKICNEPM VFYRAADGQV AALEDFCPHR GAPLSLGFVR
DGVLVCGYHG LEMGCNGKAT GMPGQRVGGF PPIRSFPVVE RYGFIWVWPG DASEADPARL
PALSWAEDPA WAHGGGLYHI RCDYRLMIDN LMDLTHETYV HATSIGQKEI DEAPPKTTAN
GDEVVTSRFM QNVMPPPFWR MALRGNGLAD DVPVDRWQIC RFTPPSHVMI EVGVAHAGHG
GYDAPAELKA SSIVVDFITP ETDTSIWYFW GMARNFRPDD HALTAEIREG QGKIFAEDLE
MLERQQLNLE QWPDRKLLKL NIDAGGVLSR KVIERLLAAE QASSPQRPVI PVAQIKEAS
|
|---|
| |