Gene BamMC406_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5105 
Symbol 
ID6179637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2275744 
End bp2276148 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content73% 
IMG OID641684857 
ProductDNA-directed RNA polymerase II, large subunit, putative 
Protein accessionYP_001811767 
Protein GI172064116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTG CGACTGCCGT GTTGCCGAGC GCGATCGTGT TGTCCGCGGT GGCCTGGCTC 
GAGCTGCCGA GGGCGAGCGC GCTGTTGCCG GTTGCGGTGT TCGCGTTGCC GAGCGCCACT
GCGCCGCTGC CGGTCGCCGT GTCGTTCGCG CCCATTGCCA CTGCGCCGGT GCCCGTTGCG
ACGCTCGGGT CGCCGATCGC AACCGCGCCG TCGCCGCTCG CGGTGTTGCC GGAGCCGATC
GACACCGCCT TGCCGCCAGT GGCCGATGCG TTCTGGCCGA TCGCGACTGC ACCCGCCGAC
TGCGCGTTCG AGCCGTCGCC GACCGCGACG CTGCTGGTGC CGGCGGCGCT GGCGTTCACG
CCGGCTGCGA GCGAGTTGAC GCCCGTTGCG CCGTCGTTGG CGTAG
 
Protein sequence
MALATAVLPS AIVLSAVAWL ELPRASALLP VAVFALPSAT APLPVAVSFA PIATAPVPVA 
TLGSPIATAP SPLAVLPEPI DTALPPVADA FWPIATAPAD CAFEPSPTAT LLVPAALAFT
PAASELTPVA PSLA