| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5058 |
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| Symbol | |
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| ID | 6179982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2226424 |
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| End bp | 2227356 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684810 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001811720 |
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| Protein GI | 172064069 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.889535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAG AACTGCTGGT CCTCATCGCA TTGCGCGGCG AAGCGCATCG CGAGATCGCC
GCGTCGTTCG ACGTGCGCCA TGCCCCGACC GCCGAAGAAC GCGAACGCGC GATCGCCGAA
CACGGCGGCA CGATTCGCGC GGTACTGACC AACGGCAGCA CGGGCCTCGC CGCTGCCGAC
ATCGACCGCC TTCCGCGGCT CACGTTCGTG AGCGCGCTCG GCGCGGGTTA CGAGCATATC
GACGTCGCGC ATGCGAAGGC GCGCGGCATC ACGGTCGTCA CGGGCGCCGG CACCAACGAC
GATTGCGTCG CCGACCACGC GTTCGCGCTG TTGCTCGCGA CGGTGCGCGA TGTCGTGCGG
CTCGATGCGA AAACGCGCGC GGGCGTGTGG CGTGAAGGGC TGCCTATGCC GCCGAACGTA
TCGGGCAAGA AGCTTGGCAT CGTCGGGCTC GGCAAGATCG GCGAGAAGTG CGCGCGCCGT
GCGGCCGGCT TCGACATCGA GGTCGGCTAT TACAGCCGTT CGCCGAAGGA CGCTGCGCCA
TACCGCTATT TCGACCGGCT CGACGCACTC GCGCAGTGGG CCGATTTCCT GATCGTCGCG
ACGCCGGGCG GCCCGGGCAC CCGGCACCTC GTCGATCGCG CGGTGCTCGA CGCGCTCGGC
CCCGGCGGCT TTCTCGTCAA CGTGTCGCGC GGCAGTGTTG TCGATACCGC TGCTTTGGCG
GACGCGCTGC GCGAGAAACG CATCGCGGGC GCGGGGCTCG ACGTGTACGA AGGCGAGCCG
GAGCCGCCGC GTGCGCTGAC CGGTCTCGAC AACATCGTGC TGACGCCGCA TATGGGCGGT
TGGTCGCCCG AGGCGCTTGA CCGGTCGGTC CAGCAGTTTC TCGACAATGC CGCCAGGCAT
TTTGCCGGGC AGGCGGTGCT GACACCGTTG TGA
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| Protein sequence | MKPELLVLIA LRGEAHREIA ASFDVRHAPT AEERERAIAE HGGTIRAVLT NGSTGLAAAD
IDRLPRLTFV SALGAGYEHI DVAHAKARGI TVVTGAGTND DCVADHAFAL LLATVRDVVR
LDAKTRAGVW REGLPMPPNV SGKKLGIVGL GKIGEKCARR AAGFDIEVGY YSRSPKDAAP
YRYFDRLDAL AQWADFLIVA TPGGPGTRHL VDRAVLDALG PGGFLVNVSR GSVVDTAALA
DALREKRIAG AGLDVYEGEP EPPRALTGLD NIVLTPHMGG WSPEALDRSV QQFLDNAARH
FAGQAVLTPL
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