Gene BamMC406_5045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5045 
Symbol 
ID6180117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2213216 
End bp2213920 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID641684797 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001811707 
Protein GI172064056 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.521879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT CCCGAATCGA CGCCGTTCGC GACGGCCTGT TTCGCGCGAC GACCTACGTC 
GACACGCTGA ACCTGTGCTT CAGCCAGTTC TTCGTGCGAT CGCCGCACGG CGACGTGCTG
TGCGTCGAAA CAGGCACCCG GTCCAATTTC ACGCAGCTGA GCGCGGCGCT CGACGGCGTC
GGCATCGCGC CGTCGATGGT CAGCAGCGTG ATCGTCCCGC ACTTCGAGGC CGACGAAATG
GGCGCGCTGC CCGATTTCCT CGCGGCCAAC CCGGCGCTCG TCGCGTACGG ACATCCGATG
TGTACATGGG GGCTCGCCGA CGTATTCGGC GTGCGCGCGA TTCCGCTGAA GGATGGGGAG
CCGACGACGC TGTCGGGCAC CGGCGTCGTG CCGGTCTTCA CGACACACGT GCATCAGTGG
GATGCGCTCG TCGTGTATCT GCCGGCGTAC AAGGCGCTGC TGTCGTCGGA CATTTTGATG
CGCTTCGGCC GGGAGGACGC CGACGATCCT CTGCCCGAGA TCCTCGATGC AATCACGCGC
TCCGACTACC TGCCGTCGCT CGCACACCTG GCGCGCGCGC TGCGCCGCAT CCAGGCGCTC
GATCTCGACA TCATCCTGCC GATGCACGGC CCGGCGATCA CGCACGACAT TCCGCGCGTA
ATCGCCGGTG TCATCGCCCA CTGCGAGGCG GCCGCGGCGG CGTAG
 
Protein sequence
MSASRIDAVR DGLFRATTYV DTLNLCFSQF FVRSPHGDVL CVETGTRSNF TQLSAALDGV 
GIAPSMVSSV IVPHFEADEM GALPDFLAAN PALVAYGHPM CTWGLADVFG VRAIPLKDGE
PTTLSGTGVV PVFTTHVHQW DALVVYLPAY KALLSSDILM RFGREDADDP LPEILDAITR
SDYLPSLAHL ARALRRIQAL DLDIILPMHG PAITHDIPRV IAGVIAHCEA AAAA