| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5012 |
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| Symbol | |
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| ID | 6180674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2170295 |
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| End bp | 2171950 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684764 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001811674 |
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| Protein GI | 172064023 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGG CAGGACTGCG TGCTAATCGC ACCAGTGACG TTGAGGCAAC CATCTCACAT
GATTCGACGG GCCACACGCT GCATCGTGGC CTGACTTGGA AAGACGCATT CTGGGTAACG
AGCGGCGTGC CGGCAGGCGT GCTGTTCACG ATCGGCGGCG TATGCGCGAC GATCGGCCAG
CCCGCGTGGG CGATCTGGAT CGCCGCGATC ACGATGGGGC TGATTCAAAG CGCGACTTAT
GCGGAAATAT CCGGGCTATT TCCCCATAAA TCGGGCGGCG CGTCCGTGTA TGGCGCGATC
GGCTGGGTCC GTTACAGCAA GCTGATTGCC CCTGTGTCCG TGTGGTGCAA CTGGCTCGCG
TGGTCGCCGA TGCTCGCGCT CGGCTGCGGC CTCGCGGCGA GCTATGCGCT CACGAGTCTC
TTTCCCGCCG ATGCGGCGGT ACTGCACTGG CAGCTCAGGA TCGCGGATCT CGGTTTCATC
AAGCCGGGCC TTTCCCTGCG AATCAACGCG ACGTTCATCA TCGCGACGAT TCTGCTTCTC
ATCACGTTCA AGCTTCAGCA CAGCGGCGCG TCGAAGGCTG CGCGCACGCA GCGCATTCTT
GGCATCGCAT CGCTCACGCC GCTGCTGATC GTCGGCATCG TGCCGTTCGT CACCGGCGAC
GTGCCGATGT CGAACCTGCT CCCGCTGCTG CCGCTCGGTC ACGACGCGAA CGGCAACCTC
ACGACCGCGA CGTTCGGCTC GTGGAACGGG CAGGGCGTCA CGATGGCGCT CGGCGCGATG
TTCATGGCCG GCTGGGCGTC GTACGGCTTC GAGACGGCCG TCTGCTACAC GCGCGAATTC
CGCGATCCGC GTCGCGACAC CGCGAAGGCG ATCTTCTGGT CGGGCGCGCT GTGTCTCGTC
GTGATGACGC TCGTGCCGAT GGCGTTCCAG GGCGCGCTCG GCACGCAGGC GATGCTCGAT
CCGGCGATCG GCGACGGCAC CGGTGTCGCG GCCGCGATGG CGAGGATCGT CGGCGGCGGC
GCATGGGTCG CGAATGCGGT CGTCGTGATG CTGATGCTGT CGATCCTGCT GATCGTGATG
ACATCGATGA TGGGCTCGTC GCGCACGCTG TACCAGGCAT CGGTCGACGG CTGGCTGCCG
AAGTACCTGT CGCACGTGAA TGAGCACGGC TCGCCCACGC GCGCGATGTG GACCGATCTC
GGCTTCAACC TCGTGTTGCT GATGATGTCG GACTACATGA CAGTGCTGTC GATCTCGAAC
GTCTGCTACA TGCTGTTCGT ATTCCTGAAC CTTCAGTCGG GCTGGATCCA CCGGATGGAT
CGCGGCAACT GGGATCGGCC GTTCCGCTGC CCGACCTGGC TGCTCGTCGC CGGTTCGATT
TGCGGCTACG CGAACCTCGT CTATGTCGGC GCGGGCGCGA ACCTGCAGGG CGAAGGCACG
CTGCGCAACG GGCTGATCGC GATGCTGCTG ATCGTGCCGG TGTTCCTGTT CCGCCACTAC
TGGCAGGATC GCGGCCGCTT CCCCGCGCAG ATGCAGCGCG ACATGGAACT CGAAGTGCCG
AAGCGTGCGA TATGGCTGAG CCTGATGCCG TATGCGGCGC TGATCGGCGC GGGGCTCACG
ATCTGGCTGT CGTATTACTT CGCGTGGGTG AAGTAA
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| Protein sequence | MSQAGLRANR TSDVEATISH DSTGHTLHRG LTWKDAFWVT SGVPAGVLFT IGGVCATIGQ
PAWAIWIAAI TMGLIQSATY AEISGLFPHK SGGASVYGAI GWVRYSKLIA PVSVWCNWLA
WSPMLALGCG LAASYALTSL FPADAAVLHW QLRIADLGFI KPGLSLRINA TFIIATILLL
ITFKLQHSGA SKAARTQRIL GIASLTPLLI VGIVPFVTGD VPMSNLLPLL PLGHDANGNL
TTATFGSWNG QGVTMALGAM FMAGWASYGF ETAVCYTREF RDPRRDTAKA IFWSGALCLV
VMTLVPMAFQ GALGTQAMLD PAIGDGTGVA AAMARIVGGG AWVANAVVVM LMLSILLIVM
TSMMGSSRTL YQASVDGWLP KYLSHVNEHG SPTRAMWTDL GFNLVLLMMS DYMTVLSISN
VCYMLFVFLN LQSGWIHRMD RGNWDRPFRC PTWLLVAGSI CGYANLVYVG AGANLQGEGT
LRNGLIAMLL IVPVFLFRHY WQDRGRFPAQ MQRDMELEVP KRAIWLSLMP YAALIGAGLT
IWLSYYFAWV K
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