| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4982 |
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| Symbol | |
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| ID | 6180789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2134419 |
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| End bp | 2136719 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684734 |
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| Product | malic enzyme |
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| Protein accession | YP_001811644 |
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| Protein GI | 172063993 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.163717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA CAGAGACCCA GCAGCAGGCC GCGTACGACT ATCACGAGTT TCCTACCCCG
GGGAAGGTCT CGGTCGTCGC CAGCAAGCCG CTCGTGACGC AGCGCGATCT CGCGCTGGCC
TACACGCCGG GCGTCGCCAG CGTGTGCGAG GCGATCGCCG CCGATCCGCT GCAGGCGCGC
CGCTTCACGA GCCGCGGGAA TCTGGTGGGC GTGATCACCA ACGGCACCGC CGTGCTGGGT
CTGGGCAACA TCGGCGCGCT CGCGTCGAAG CCGGTCATGG AAGGCAAGGC CGTGCTGTTC
AAGAAGTTCG CGGGCATCGA CGTGTTCGAC ATCGAGATCA ACGAGACCGA TCCGGACAAG
CTCGTCGACA TCATCGCGGG CCTGGAGCCC ACGTTCGGCG GGATCAACCT CGAGGACATC
AAGGCGCCGG AGTGCTTCAC AGTCGAGCGC AAGCTGCGCG AGCGCATGAA GATTCCCGTC
TTCCACGACG ACCAGCACGG CACCGCCATC ACCGTCGCGG CCGCGTTCAT CAACGGGCTG
AAGGTTGTCG GGAAGTCGAT TACGGCGGTG AAGGTCGTGA CGTCGGGCGC CGGCGCCGCG
GCGCTGGCCT GTCTGGACCT GCTGGTCGAC CTCGGGCTGC CGGTCGAGAA CATCTGGGCG
ACGGATATCG AAGGCGTCGT CTATCGCGGC CGCACCACGC TGATGGATCC GGCCAAGGAA
CGCTTCGCGC AGCCAACCGA CGCGCGCACG CTGGCTGAAG TGATCGGCGG CGCCGACGTG
TTCCTCGGGC TGTCGGTCGG CGGCATCCTC AGCGCGGACA TGCTGAAGGC GATGGCCGCA
CGTCCGCTGA TTCTCGCGCT GGCCAATCCG ACGCCGGAAA TCTTCCCGGA ACTGGCGCAC
GCCACGCGCG ACGATGTCGT GATCGCGACG GGCCGTTCGG ATTTCCCGAA CCAGGTCAAC
AACGTCCTGT GCTTCCCGTA TATTTTCCGC GGCGCACTGG ATGTGGGCGC AACGACCATC
ACCCGCGAAA TGGAAATTGC CGCTGTTCAC GCGATCGCGG GCCTCGCGGA AGAAGAGCAG
AACGACGTCG TCGCGGCGGC CTATGGTGGC GACGAAGTGT CGTTCGGCCC GCAATACCTG
ATTCCGAAGC CGTTCGATCC GCGCCTGATC GTTCGCATCG CACCGGCCGT GGCCAAGGCG
GCGATCGAAG GCGGCGTGGC GACGCGTCCG CTCGAGGATC TCGACGCGTA TGTCGAGCAG
CTGCAGCAGT TCGTCTACCA CTCGGGCGCG TTCATGAAGC CGCTGTTCGC GGCCGCGCGT
CAGCTCGTGC GTGACGGCGG CAAGGCGCGC ATCGTGTTCA CCGAAGGCGA GGACGAGCGC
GTGCTGCGCG CGGTGCAGGT CATCGTCGAC GAGAAGCTCG CGCGGCCGAT CCTGGTCGGC
CGTCCCGAGG TGCTGCTGGC GCGTATCGAG CGGTTCGGCC TGCGCCTGCG ACTCGGTCAG
GATGTCGAGG TGACCAATCC GGAATATGAC GAGCGCTTCC CGCAATACTG GACGACGTAC
TGGGAACTGC GCTGCCGCGA CGGCATTTCG AAGGAAATGG CGCGCGTCGA AATGCGGCGT
CGGCTGACGC TGATCGGCGC GATGATGGTT CGGCTCGGCG ATGCGGACGG GATGATCTGC
GGGACGGTCG GTGAATATCA CAATCACCTG CGGTTCGTGG ACGAAGTGAT CGGCAGGAAG
CCCGATGCGT CGACCTACGC GGCGATGAAT ATCCTGCTGC TCAATCAGCG GACGGTCGCG
CTGGTGGATA CGCACGTCAA CGACAACCCC GATGCGGAGC AGATCGCGGA ATTCACGATC
GCCGCGGCGC GGCAGATGGA GTGGCTGAAT CTGACGCCGA AGGTGGCGCT GCTGTCGCGG
TCGAACTTCG GCTCGGGGAG CGCGGCTTCG GGCGTGAAGA TGCGGCAGGC GCTGGAGATC
ATTCGCGCGC AGGCGCCGGA TATCGAGGCC GATGGCGAGA TGCATGGCGA CTGCGCGCTC
GATGAAGGGC TGCGGGCGCG GCTGCTGCCG ATGTCGCCGC TGAAGGGCGC GGCGAACCTG
CTGGTGTGTC CGAACGTCGA TGCGGGGAAT ATTGCCTATA ACCTGCTCAA GACCGAAGCC
GGCAGCAACG TTGCCGTGGG ACCGTTCCTG CTCGGGGTCA ATGCACCGGT GAACATTCTC
ACTTCGAGCG CGACGGTGCG GCGGATCGTG AACATGACGG CGTTGACGGT GATCGAGGCG
AATCGGAACG TGGCTGCTTG A
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| Protein sequence | MKQTETQQQA AYDYHEFPTP GKVSVVASKP LVTQRDLALA YTPGVASVCE AIAADPLQAR
RFTSRGNLVG VITNGTAVLG LGNIGALASK PVMEGKAVLF KKFAGIDVFD IEINETDPDK
LVDIIAGLEP TFGGINLEDI KAPECFTVER KLRERMKIPV FHDDQHGTAI TVAAAFINGL
KVVGKSITAV KVVTSGAGAA ALACLDLLVD LGLPVENIWA TDIEGVVYRG RTTLMDPAKE
RFAQPTDART LAEVIGGADV FLGLSVGGIL SADMLKAMAA RPLILALANP TPEIFPELAH
ATRDDVVIAT GRSDFPNQVN NVLCFPYIFR GALDVGATTI TREMEIAAVH AIAGLAEEEQ
NDVVAAAYGG DEVSFGPQYL IPKPFDPRLI VRIAPAVAKA AIEGGVATRP LEDLDAYVEQ
LQQFVYHSGA FMKPLFAAAR QLVRDGGKAR IVFTEGEDER VLRAVQVIVD EKLARPILVG
RPEVLLARIE RFGLRLRLGQ DVEVTNPEYD ERFPQYWTTY WELRCRDGIS KEMARVEMRR
RLTLIGAMMV RLGDADGMIC GTVGEYHNHL RFVDEVIGRK PDASTYAAMN ILLLNQRTVA
LVDTHVNDNP DAEQIAEFTI AAARQMEWLN LTPKVALLSR SNFGSGSAAS GVKMRQALEI
IRAQAPDIEA DGEMHGDCAL DEGLRARLLP MSPLKGAANL LVCPNVDAGN IAYNLLKTEA
GSNVAVGPFL LGVNAPVNIL TSSATVRRIV NMTALTVIEA NRNVAA
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