| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4938 |
|---|
| Symbol | |
|---|
| ID | 6180611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 2085524 |
|---|
| End bp | 2086441 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641684691 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001811601 |
|---|
| Protein GI | 172063950 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC CGCTAGCCGA GGTCGTGACG CTGCTGCAGC CGAGCACGCG GTATTCCAAA
CTCGTTCACG GCGCGAGCCC GTGGCGCATC AGCCGGACGG TCGCCGGCGA GCCGTTCTAT
TGCGTGGTCC TGGAGGGCGG ATGCCGGGTC GCGATCGACG GGCATCCGCC GATCGAGTTG
CTGCCCGGCG ATTTCGTGCT GATTCCGGCG GCCTACGGCG TCGCGATATC CAGTCTCGAA
CTACCGCCGC CGGGCGTCGA AACGGCCGCG CCGGTCGTGC TCGACAACGG CGAATACCGG
ATCGGCGACG CAAGCCGTCC GGTCGACGCG CGCCTGATGG CCGGCCACTG CAGCTTCAGT
TCGCCCGACG CGGCACTGCT GGTGTCGTTG CTGCCGCAAT ACGTGCACGT GCGCGGCGAA
CCGCGCCTCA CCACGCTCGT GCAACTGGTG CGCGACGAAT CGCGTGCGCA GCGGCCGGCG
CGCGAACTCG TGCTGTCGCG CCTCGTGGAA GTGCTGCTGA TCGAGGCATT GCGGTTTTCG
GCAGACACGG GCGCATCGCC CGGCCTCGTG CGCGGGCTCG CCGACAGCCG TCTCGCCGCC
GCGATCCGCG CAATGCACGA ACGCCCCGCG CACCCGTGGA CGGTCGTCGA GCTCGCGAAG
GAAGCGGCGC TGTCGCGTTC GACCTTCTTC GAACGCTTCA GCCGCGCGGT CGGCGTCGCG
CCGATGGAAT ATCTGCTCAC CTGGCGCATG GCGCTCGCGA AAAACCTGCT GCGCCGCGAC
GAGGGGCGCA TCGCGGAGAT CGCCGGGCGC GTCGGCTACA GTTCCGCGAG CACCTTCAGC
GTCGCGTTCA CGCGGCACGT GGGCCGGCCG CCCGCGCAAT ATGCGCGCGA CGAACGCGCG
GCGGCGAGCG ACGCATGA
|
|---|
| Protein sequence | MIDPLAEVVT LLQPSTRYSK LVHGASPWRI SRTVAGEPFY CVVLEGGCRV AIDGHPPIEL
LPGDFVLIPA AYGVAISSLE LPPPGVETAA PVVLDNGEYR IGDASRPVDA RLMAGHCSFS
SPDAALLVSL LPQYVHVRGE PRLTTLVQLV RDESRAQRPA RELVLSRLVE VLLIEALRFS
ADTGASPGLV RGLADSRLAA AIRAMHERPA HPWTVVELAK EAALSRSTFF ERFSRAVGVA
PMEYLLTWRM ALAKNLLRRD EGRIAEIAGR VGYSSASTFS VAFTRHVGRP PAQYARDERA
AASDA
|
|---|
| |