Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4878 |
Symbol | |
ID | 6179767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2015327 |
End bp | 2016217 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684631 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811542 |
Protein GI | 172063891 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000628995 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000000242081 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAAGC TCCGCCCTCA CCTTCCACTG AATGCGTTGC GCGCGTTCGA ATCGTCGGCG CGCCATCTGA ATTTCACGCG CGCCGGCCTC GAGCTGAGCG TGACGCAGGC GGCCGTGAGC CAGCAGGTGC GCTCGCTGGA GGAGCGGCTC GGCTGCGCGC TGTTCACCCG GCTGCCGCGC GGCCTCGGGC TCACCGACGA AGGACGCGCG CTGCTGCCGG TGCTCAGCGA CGCATTCAGC CGGATCGAAA CCGTGCTCAA GCAGTTCGAC GGCGGGCGCT TCCACGAGGT GCTGACGCTC GGCGCGGTCG GCACCTTTGC CATAGGCTGG CTAATGCCAC GGTTGAAGCG CTTCGGCGAC ACGCACCCGT TCGTCGAGCT GCGGCTGCGG ACCAACAACA ACGTCGTCGA CCTCGCGGCC GAGGGCCTCG ATTTCGCGAT CCGCTTCGGT GAAGGCAACT GGCCGGCGAC GCGCAACGAG CGGCTGCTCG ACGCGCCGCT CACCGCGCTG TGCGCGCCGG AGATCGCGCG GCGCCTCGCG GCGCCGGCCG ATCTCGCGAA CGAAACGCTG CTGCGCTCGT ACCGCACCGA CGAATGGCTC GGCTGGTTCG ACGCCGCGCA GCTCGAACCG TGGCCGGTCA ACGGGCCGGT GTTCGATTCG TCGCGGCTGA TGGTCGAGGC GGCGATGCAA GGCGCGGGCA TCGCGCTCGC GCCGGCCTGC ATGTTCGCGC GCGAACTGCA GCTGGGCCTG CTCGCGCGGC CGCTCGACAT CGACGTGCGC GCGGGCGGCT ACTGGCTCAC GTCGCTGAAG TCGAAGCCGC TCACGCCGGC GATGACGCTG TTTCGCGACT GGATCGTCGC GGAAGCGGCC GGCGCGGCAC CGGTCGAATG A
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Protein sequence | MTKLRPHLPL NALRAFESSA RHLNFTRAGL ELSVTQAAVS QQVRSLEERL GCALFTRLPR GLGLTDEGRA LLPVLSDAFS RIETVLKQFD GGRFHEVLTL GAVGTFAIGW LMPRLKRFGD THPFVELRLR TNNNVVDLAA EGLDFAIRFG EGNWPATRNE RLLDAPLTAL CAPEIARRLA APADLANETL LRSYRTDEWL GWFDAAQLEP WPVNGPVFDS SRLMVEAAMQ GAGIALAPAC MFARELQLGL LARPLDIDVR AGGYWLTSLK SKPLTPAMTL FRDWIVAEAA GAAPVE
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