| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4855 |
|---|
| Symbol | |
|---|
| ID | 6181270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1992667 |
|---|
| End bp | 1993404 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641684609 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001811520 |
|---|
| Protein GI | 172063869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.489891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0140803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCTC TCATCATCAT CGCCGGCCTG TGGGCCGGCC TGCAGAATGC CCTCGCGGGC
GGCGGTTCGT TCGTCACGCT GCCCGCGCTG ATCCTGTCGG GCATGTCGCC GCTCGCGGCG
AACATCACGT CGACGGTCGC GCTGTTCCCC GGCCAGGTCA CGACAGGCTG GGCGAGCCGA
AACATGGTGC GCGGCGCGGG CAAGCTGCCG TTTCGCGCGC TGTTCGCGAT CAGCGTTGCC
GGCGGTGCAC TCGGCGGGCT GCTGCTGCTG AAAACCCCGT CGTCGATCTT CTCGCACCTC
GTGCCGTGGC TCGTGCTGTT CGCGACGGTC GTGTTCGCGT GGGGCAGCTT CTTCCGCAAG
CCCGGCGCGG ACACGCAGCA TCTCGGCCCC GTCACGGCCG CGATCGCGCA GTTCCTGATC
GCGATCTACG GCGGCTACTT CGGCGGCGGC ATCGGCTTCC TGATGATGGC GGCACTGACG
ATGGCCGGCC TGTCGCCGCG TCACGCGATG TCGACCAAGA ACGCACTCGC GGGCGTGATG
AATGCATCGG CGGTCGTGCT GTTCCTGACG TCGCCGCACC TGCACTGGCA GGCGGCGATC
GCGCTCGGCG GCGGCGCGAT CGTCGGCGGC CTGCTCGGCG CGTGGGCGCT GCACCGCGTG
AACGAGCGCG TGCTGCGGAT CGCGATCGTC TGCATCGGCG TCGCGCTGAC CGTCGGGCTG
TTCGTCAAGC CGATCTGA
|
|---|
| Protein sequence | MLALIIIAGL WAGLQNALAG GGSFVTLPAL ILSGMSPLAA NITSTVALFP GQVTTGWASR
NMVRGAGKLP FRALFAISVA GGALGGLLLL KTPSSIFSHL VPWLVLFATV VFAWGSFFRK
PGADTQHLGP VTAAIAQFLI AIYGGYFGGG IGFLMMAALT MAGLSPRHAM STKNALAGVM
NASAVVLFLT SPHLHWQAAI ALGGGAIVGG LLGAWALHRV NERVLRIAIV CIGVALTVGL
FVKPI
|
|---|
| |