Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4849 |
Symbol | |
ID | 6180965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1987872 |
End bp | 1988276 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641684603 |
Product | transposase IS111A/IS1328/IS1533 |
Protein accession | YP_001811514 |
Protein GI | 172063863 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0631006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAACG ATAGCACGCT GTACGTCGGA CTGGATGTGC ACAAGGAATC GATCACGGTT GCGTATGCGG TCGACGCTGG CGAGTTCGAA TCACTCGGCA AGATCGGCAC GACGAAGACG GAAATCGATC GGTTGTGCAA GCGGCTGCAG TCGAAGGCTC CGCACGTGCA AATCGTCTAC GAAGCCGGCC CGTGCGGCTA TGGACTGTAC CGGCAGCTCG TGGAACGAGG CTTCGAATGC ATGGTCTGCG CGCCGTCACT GATTCCCCAG AAACCCGGCG ATCGCGTCAA GACGGACCGG CGCGATGCGG TGAAGCTCGC GTGTGCGTTG CGCGCCGGCG ATCTGTCGGC AGCGCACCCC TTCATTTCGT GCGATTCAAC GCCGCGGTAT GGCACTGGAA CATAG
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Protein sequence | MRNDSTLYVG LDVHKESITV AYAVDAGEFE SLGKIGTTKT EIDRLCKRLQ SKAPHVQIVY EAGPCGYGLY RQLVERGFEC MVCAPSLIPQ KPGDRVKTDR RDAVKLACAL RAGDLSAAHP FISCDSTPRY GTGT
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