Gene BamMC406_4806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4806 
Symbol 
ID6180349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1939540 
End bp1940886 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content67% 
IMG OID641684565 
Productglutamine synthetase catalytic region 
Protein accessionYP_001811476 
Protein GI172063825 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.583178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TCGTTCCCGT GCTGGTCGAT GAAGTCCGCG CATTCCGGCA GGCGCATCCC 
GAGATCCGTT ATGTCGACCT GATCTGTCTG GACCTGCCGG GCCACTTCTA CGGCAAGCGC
TATCCGATCG ATGCGCTCGA GAAGGTCGCG TCCGGTGCGC TGCTGAAGCT GCCGCAGAAC
TGCGTGCTGC TCGGCACGCA GGGCGGCCTC TACAAGATCG GCGATTACTG CTTCAACGAC
GGCGACCCCG ACGCGCCGCG CCGTCTGATC CCCGGCACGC TGAAGCCGGT GCGCTGGGAG
CGGCAGCCGC TCGCGCAGAT GCTGATCAGC TCCGACGGCA CGGATGCGCC GATCGAGTTC
GAGCCGCGCG AGGTACTTGC GCGCGTGCTG CGGCGATTCG CGGCGCGCGG TATCCGGCCG
GTCGTCGCGT TCGAACTCGA GTTCTATCTG TTTGCCGCGC AGCTCGCGGA CGGGATGCCG
CAGTATCCGC GCGACCGCCT GAGCGACGAC CGCGACGATC AGCCGAACAT GCACATCGAA
CGCCTGTCGC GGTTTTCCGA CGTGCTGCAC GAGATGGTGG AGGCCGCGCG CGAGCAGGGT
GTCGACGCGA CGGTGATCAC GGCCGAGCTC GGGCCCGGCC AGTTCGAGAT CAACTTCGGC
CATACCGACG ATGCGTTGCG CGCGGCCGAC TGGTCGGCGC TGTTCTGCCG CAGCACGCGC
GGCGTCGCGT TGCGGCACGG CTATCGCGCG AGCTTCATGG GCAAGCCGTA CCTGCATGCG
CCGGGCAGCG GGATGCATGT GCACGTTAGC CTGTACGACG AGGCGGGCCG CAACCTGCTC
GCGGCGGACG GGCAGCGGCC GCTGCGGCAT GCAGTGGCCG GCTGCCTCGC GCTGCTGCCG
CACTGCATGC CGGTGTTCGC GCCGAATCAC AATGCGTTTC GCCGCTACGG ATCGATGGTG
AACGCGGCGA GCCGTGCAAG CTGGGGCTTC GAGGATCGCG ACGCGTGCAT CAGGATTCCG
GATTCGGATG CGCGCAATCT GCGCATCGAG CATCGGCTCG CGAGCGCGGA CGCAAATCCG
TATCTGGTGC TCGCGGCGAT CCTGGCCGGG ATGGAGCACG GGCTCGATGC GCGGCTCGAG
CCGATCGCGT CGCTCAACGA CGATCGCGGC AGCGGGATCG ATTTTCCGAA GGAGATGCTG
TCGGCCGTCG CGGCGATGCA GGATCACGCG GCCGTGCGCG ACGGGCTCGG CAGCGAGTTC
GTGATGGTGT ATTGCGAGAA CAAGCGGCAG GAGGAGCTGG ATTTTCGCAA CGAGATCGGT
GCGCGCGAGT ATCGGTGGTT TCTGTGA
 
Protein sequence
MADVVPVLVD EVRAFRQAHP EIRYVDLICL DLPGHFYGKR YPIDALEKVA SGALLKLPQN 
CVLLGTQGGL YKIGDYCFND GDPDAPRRLI PGTLKPVRWE RQPLAQMLIS SDGTDAPIEF
EPREVLARVL RRFAARGIRP VVAFELEFYL FAAQLADGMP QYPRDRLSDD RDDQPNMHIE
RLSRFSDVLH EMVEAAREQG VDATVITAEL GPGQFEINFG HTDDALRAAD WSALFCRSTR
GVALRHGYRA SFMGKPYLHA PGSGMHVHVS LYDEAGRNLL AADGQRPLRH AVAGCLALLP
HCMPVFAPNH NAFRRYGSMV NAASRASWGF EDRDACIRIP DSDARNLRIE HRLASADANP
YLVLAAILAG MEHGLDARLE PIASLNDDRG SGIDFPKEML SAVAAMQDHA AVRDGLGSEF
VMVYCENKRQ EELDFRNEIG AREYRWFL