Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4782 |
Symbol | |
ID | 6179492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1918348 |
End bp | 1919040 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641684541 |
Product | hypothetical protein |
Protein accession | YP_001811452 |
Protein GI | 172063801 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.181394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCGA ATTTCATCGG CTCGGTCATT AACGCTTTAC CCATGGACCA AATGATCGCC GGCCCGTTAA AGGCGATGAT CAGCGCGCAG ACGCAGGCCG CGAAGAGCTA CGCGGATTTC CTGATGCAGG TCTGCATCCA GGGCGGCAAG GCCGTGGCCG TCCAGTTCGA CTACGACGAG ACGCTGGTGG ACGAAAGCGG CGTGTCGAAA GGCGTCGTGC AGAAGACCAT GCGCATCCCG CTGCTCGCGG CGATCGTGCA CCCGATCATC GCGATCGAGG AAGGCACGAT CGACTTCGAG ATGGAGATCA CGCAGTCGGA GAAGTCGTCG TCGTCGACCG AGGCCGGCGG CGAATTCCAG GCGAAGTTCG GCTGGGGGCC GATCAGCGTG AGCGTGTCGG GGCGCGTGTC GCACAAGGCG GAGCAGACGC GCAGCACCGA CACGCGCGCG AAATACTCGA TCCATACGCA GGTGAAGCGC CAGTCGCCGC CCGAAGCGCT GATGCGCGTG ATCGACTTCC TGACCGAAGC CGCGACCAAG CCGGTGGTCA CCGAAGGCAA CGCGAAGGAC GTGAAGCCGC TGCCGGCGAC GCCGACCGAC GGCAAGCTGG TCGGCGACGC GTCCGGATCC GGCGGCAGCG CGGCCGCGCC GGCCGCCGCC GGTGCGGATG CCCGGCAGCC GGCGCACGCG TAA
|
Protein sequence | MDANFIGSVI NALPMDQMIA GPLKAMISAQ TQAAKSYADF LMQVCIQGGK AVAVQFDYDE TLVDESGVSK GVVQKTMRIP LLAAIVHPII AIEEGTIDFE MEITQSEKSS SSTEAGGEFQ AKFGWGPISV SVSGRVSHKA EQTRSTDTRA KYSIHTQVKR QSPPEALMRV IDFLTEAATK PVVTEGNAKD VKPLPATPTD GKLVGDASGS GGSAAAPAAA GADARQPAHA
|
| |