Gene BamMC406_4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4782 
Symbol 
ID6179492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1918348 
End bp1919040 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID641684541 
Producthypothetical protein 
Protein accessionYP_001811452 
Protein GI172063801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.181394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA ATTTCATCGG CTCGGTCATT AACGCTTTAC CCATGGACCA AATGATCGCC 
GGCCCGTTAA AGGCGATGAT CAGCGCGCAG ACGCAGGCCG CGAAGAGCTA CGCGGATTTC
CTGATGCAGG TCTGCATCCA GGGCGGCAAG GCCGTGGCCG TCCAGTTCGA CTACGACGAG
ACGCTGGTGG ACGAAAGCGG CGTGTCGAAA GGCGTCGTGC AGAAGACCAT GCGCATCCCG
CTGCTCGCGG CGATCGTGCA CCCGATCATC GCGATCGAGG AAGGCACGAT CGACTTCGAG
ATGGAGATCA CGCAGTCGGA GAAGTCGTCG TCGTCGACCG AGGCCGGCGG CGAATTCCAG
GCGAAGTTCG GCTGGGGGCC GATCAGCGTG AGCGTGTCGG GGCGCGTGTC GCACAAGGCG
GAGCAGACGC GCAGCACCGA CACGCGCGCG AAATACTCGA TCCATACGCA GGTGAAGCGC
CAGTCGCCGC CCGAAGCGCT GATGCGCGTG ATCGACTTCC TGACCGAAGC CGCGACCAAG
CCGGTGGTCA CCGAAGGCAA CGCGAAGGAC GTGAAGCCGC TGCCGGCGAC GCCGACCGAC
GGCAAGCTGG TCGGCGACGC GTCCGGATCC GGCGGCAGCG CGGCCGCGCC GGCCGCCGCC
GGTGCGGATG CCCGGCAGCC GGCGCACGCG TAA
 
Protein sequence
MDANFIGSVI NALPMDQMIA GPLKAMISAQ TQAAKSYADF LMQVCIQGGK AVAVQFDYDE 
TLVDESGVSK GVVQKTMRIP LLAAIVHPII AIEEGTIDFE MEITQSEKSS SSTEAGGEFQ
AKFGWGPISV SVSGRVSHKA EQTRSTDTRA KYSIHTQVKR QSPPEALMRV IDFLTEAATK
PVVTEGNAKD VKPLPATPTD GKLVGDASGS GGSAAAPAAA GADARQPAHA