Gene BamMC406_4779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4779 
Symbol 
ID6179701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1915168 
End bp1916277 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content68% 
IMG OID641684538 
Producthypothetical protein 
Protein accessionYP_001811449 
Protein GI172063798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.679428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC CTGTCCGAGT CGTTTCCGTG CGCTATGCGT GCGACAGCAA ACCCAAGCGT 
GCGCCCGACG AAGATCTCGA AGCTTATGCG GCGCGCGTGC AGCAGGTCGC GCTCGATCAC
CTGAGCGGCG CGCTGTCGAG CGCATTCGAA GCCGTGCGTC GCGACGCGCA AGACGACGAT
GCGCCGCCCG TCACGTTCGT GACCGCGCCC GAGTTCTACT GGAACGTGCG GTGGGACGAG
CTGCGCGACG TCGACGAACT CCACGCGCTC GTCGACCTGC AGCTCGATCC GGTGCGGCGC
GCGATCGGCG CGATCGCAGA TCGCTTTCCG GTGCAACAGT ACGGGCCGAT CGTGTTCCTG
CCAGGCACCG TCGCGATGCT CGTGAAGCAC GAGGCGGCGG CCGACGTGCC CGATAACGGC
ATGCTCGTCG GCCCATACGT ATCGCTCAAT TTCACGTTCG CGACGACCAA TTTCCTGCCG
CCGCTCGCGC ACGACGACGA CGACGGCGAC GGCGACGCGC CGCGCCGCGC CGCGATCTGG
CCGAAGCGGC ATACATCGTG GATCGACTAC GGCAAATCGG TCGATGCGCC CGACACGCCG
CTCGCCCACA CGTTCCGGCT CGACGACGGC ACGCTCGTGA CGGTGCTGAA GACGAGCGAC
GTGTCACCGC AAAGCGCGAC GGCCGAGCCG CCGCCATCGT CGCCGTACCA GGGCCCGCGC
CTGTCGGACA GCTTCGACAA CCGGCTCGGT GACGCGCCGC CGTTCGGCAT CGACATCTGC
CTCGACTTCC TGAAATGGCG CCGGCATCCG GGCAACGACG TCAAGCCGCC GCATCTCGAC
GACAGCGCAC TCGTGCTCGA CTTCGTGCTG TCGTACGGCG TGAATCCGAC CGATCGCGCG
TTCGACGTGC CCGACTCGCT GCAATACATC GCGCACAACG ACGGCCGCAG CCGGAAGGAA
GTCGTCGTGT TCGCGGTCGA CCGCACGCGA ACGCGCTGGC AGCGCATCGC CGAAGCGCCG
TGCGTGCGTC ACCTGTCGAG CTCGGATCGC GAACGCGTCG CAATCCACGC GTTCGACGTG
GACGTGCCGG GCGCGGACGG CACACCGTGA
 
Protein sequence
MKQPVRVVSV RYACDSKPKR APDEDLEAYA ARVQQVALDH LSGALSSAFE AVRRDAQDDD 
APPVTFVTAP EFYWNVRWDE LRDVDELHAL VDLQLDPVRR AIGAIADRFP VQQYGPIVFL
PGTVAMLVKH EAAADVPDNG MLVGPYVSLN FTFATTNFLP PLAHDDDDGD GDAPRRAAIW
PKRHTSWIDY GKSVDAPDTP LAHTFRLDDG TLVTVLKTSD VSPQSATAEP PPSSPYQGPR
LSDSFDNRLG DAPPFGIDIC LDFLKWRRHP GNDVKPPHLD DSALVLDFVL SYGVNPTDRA
FDVPDSLQYI AHNDGRSRKE VVVFAVDRTR TRWQRIAEAP CVRHLSSSDR ERVAIHAFDV
DVPGADGTP