| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4741 |
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| Symbol | |
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| ID | 6180868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1877151 |
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| End bp | 1878182 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684500 |
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| Product | type III secretion exporter |
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| Protein accession | YP_001811411 |
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| Protein GI | 172063760 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.908956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.834614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA AGGACCAGAA GCCGACCGCG AAGCGCTTGC GCGAGGCACG CCAGAAAGGC
GATGTGCCGA AGAGCGCGGA GACGATCTCG TCGGCGTTCT TCGTCGGCGT GTGCGTCGCG
CTCGCGGTGG GGCTCGGCAC ACTATTCGCG CGGCTGCAGG CGCTGTTCCG GCTGGTGTTC
GACGCGGCCG GCGCGGCGGA CCCCTCCGCG CGGCTCGCGG CGCTGATCGA CGGCGCCGCG
CGCGACTGGG CCATGCTGTC CGCGCAGATC GTCGCGGCCG GGTTGCTGGC CGGCCTGCTC
GCGGGCTTCG TGCAGGTGGG TGGCGTGATG GCGTGGAGCC GGCTCGTGCC GCAGCTGTCG
CGGCTCAACC CGGCCGAGGG GCTGAAGAAC ATGTGGTCGA TGCGCAACCT CGTGAACCTC
GCGAAGATGC TGCTGAAGAC CGTGCTGCTG GCGGCGACGC TCGGCTGGCT GATCGTCGAG
TCGCTCGATC CGTCGGTGCA GTCCGGCTTC ACGCGGCCGA TGTCGATTCT CGCGCTGATC
GTGAAGCTGC TGATGCTGCT GTTCGGCTGG GCCGCGCTGA TCTATATCGT GATGGCGCTG
ATCGACATCG TGCACCAGCG GCACGAGTTC AATCAGAAGA TGAAGATGTC GATCGAGGAA
GTGCGGCGCG AGCACAAGGA AGACGAAGGC GACCCGCATA TCGAGGCGAA GCGCCGGCAG
CTCGCGCGCG AAGCGCAGTT CTCGTCGCTG CAGGACCGGA TCGGCTTCGC GTCGGTGGTC
GTCTATTCGT CGAGCGTCGC GGTCGCGCTC TACTACGGCG GGATCGGCAC GCTGCCGTGG
GTGCTCGCGC GCGGCGAGGG CGAGGCGGCC GAACGGATCG TGCGGCTCGC GCGCGACGCG
CTGCGCCCGA CGCTCGCGAA CGCCGGCCTC GCGCATGCGC TATACGACAG CACGCCTGAA
AAGGGCACGA TCCAGCAGCA GCATTTCCGC GAGGTCGCGC AGTTGCTGAA GTGGGCGACA
GGCGCTGCCT GA
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| Protein sequence | MAEKDQKPTA KRLREARQKG DVPKSAETIS SAFFVGVCVA LAVGLGTLFA RLQALFRLVF
DAAGAADPSA RLAALIDGAA RDWAMLSAQI VAAGLLAGLL AGFVQVGGVM AWSRLVPQLS
RLNPAEGLKN MWSMRNLVNL AKMLLKTVLL AATLGWLIVE SLDPSVQSGF TRPMSILALI
VKLLMLLFGW AALIYIVMAL IDIVHQRHEF NQKMKMSIEE VRREHKEDEG DPHIEAKRRQ
LAREAQFSSL QDRIGFASVV VYSSSVAVAL YYGGIGTLPW VLARGEGEAA ERIVRLARDA
LRPTLANAGL AHALYDSTPE KGTIQQQHFR EVAQLLKWAT GAA
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