| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4730 |
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| Symbol | |
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| ID | 6180692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1851229 |
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| End bp | 1852602 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684489 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001811400 |
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| Protein GI | 172063749 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.483899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGT TCGTCCCGGG CCGGCGTCGC CCTGCCGCGC TCACGCGCCC GCTCGTCTAT
CTGTCGCAGC ATCCCGATGC GTGGCTCGTC GACTGTCTCG CATCGCGCGG CTGGAACGTG
TGGCGGGCGA AATCCGTTGC GGACGCACTC AATCTCGTGA AGGCGAACCG CCTGCACGCG
GGCATCGTCG ATTTCGACGG CTTCGCGTCA CCCGACGTCG CGTCGTTCGA GGCGCTGCTG
CGCGATCCGC GTATCGGCTG GGTCGCGCTC GCCGACGACG AGCGGCTGCG CGACGCTACC
GTCGCGCGGC TGATCCGCCA GTGCTGCTTC GACTACGTGT GCAATGCGAC GGCCTGCAGG
ACGATCGGCT ATCTCGTCGG CCATGCGTAC GGGATGCTGA AACTCGTGGA CAGCGAAAAA
CCGGCCGTCG ATGCCGCGCC GCCCGGCGGG GCGATGATCG GCGCATGCGG CGCGATGCGC
CGGCTGTTCG CGACGATCCG CAAGGTCGCG AACACCGACG CATCCGTATT CATCGCCGGC
GAATCCGGGA CCGGCAAGGA GTTGACCGCG GCGGCGATCC ACCAGCATTC GTCGCGCGCC
GATGCGCCGT TCGTCGCCGT GAATTGCGCG GCCATCCCGT CGACGCTGCT GCAGGCCGAG
CTGTTCGGCC ATGAACGCGG CGCGTTCACC GGCGCGCACC AGCGCAAGAT CGGCCGCATC
GAGGCCGCGC ACGGCGGCAC GCTGTTTCTC GACGAAATCG GCGACATGCC GTTCGAAAGC
CAGACGAGCC TGCTGCGGTT CCTGCAGGAG GGCAAGATCG AGCGGCTCGG CGGGCGCGTG
TCGATTCCGG TGGACGTGCG GATCGTGTCC GCGACCCATG TCGATCTCGA GGCCGCGGTG
CAGGCGGGGC GGTTCCGGGC GGACCTGTAT TACCGCGTGT GCGTGCTGCG CATCGACGAA
CCGCCGCTGC GCGCGCGCGG CCGCGACATC ATGCTGCTCG CCGATCACGT GCTGCGGCGC
TATCGCGACG ATGGTGCGCA CCGGATTCGA GGCTTCACGC CGTGTGCGAT CGAGGCGATT
CACAATTATG CGTGGCCGGG CAACGTGCGC GAACTGATCA ATCGGATCCG CTTCGCGGTC
GTGATGACGA ATGGCCCGCT GATCTCGGCC GTCGATCTCG ATCTGAGCCA GTACACGTCG
CATCGACCGC CGACGCTCGC CGAGGCGCGC CGGCAGGCCG AGCGCCGCAC GATCGAGGAG
ACGCTGCTGC GGCATCGGCA CCAGCATGCC GACGTCGCGG CGGAACTCGG GATTTCGCGC
GCGACGCTGT ACCGCCTGAT GATCGCGCAC GGGCTGCATA GTCTGCACGG TTGA
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| Protein sequence | MPPFVPGRRR PAALTRPLVY LSQHPDAWLV DCLASRGWNV WRAKSVADAL NLVKANRLHA
GIVDFDGFAS PDVASFEALL RDPRIGWVAL ADDERLRDAT VARLIRQCCF DYVCNATACR
TIGYLVGHAY GMLKLVDSEK PAVDAAPPGG AMIGACGAMR RLFATIRKVA NTDASVFIAG
ESGTGKELTA AAIHQHSSRA DAPFVAVNCA AIPSTLLQAE LFGHERGAFT GAHQRKIGRI
EAAHGGTLFL DEIGDMPFES QTSLLRFLQE GKIERLGGRV SIPVDVRIVS ATHVDLEAAV
QAGRFRADLY YRVCVLRIDE PPLRARGRDI MLLADHVLRR YRDDGAHRIR GFTPCAIEAI
HNYAWPGNVR ELINRIRFAV VMTNGPLISA VDLDLSQYTS HRPPTLAEAR RQAERRTIEE
TLLRHRHQHA DVAAELGISR ATLYRLMIAH GLHSLHG
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