| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4688 |
|---|
| Symbol | |
|---|
| ID | 6179206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1807581 |
|---|
| End bp | 1809083 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641684447 |
|---|
| Product | betaine-aldehyde dehydrogenase |
|---|
| Protein accession | YP_001811358 |
|---|
| Protein GI | 172063707 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA CGAACTTCGT CGCCGTCAGC GACACCGTGC GCACTTTCGT CGCACGCGAC
TTCGGCCTTT TCATCGAAGG CGCGATGCAG CCCGCGCACT CGGCCGCACG GCTCGACGTG
TACGACCCGG CCACAGGCGA GCGACTCGCG ACCGTCGCGG ATGCCGACGC GCACGACGTC
GATCGCGCGG TCGCGAGCGC GAAACACGCG TTCGACACCC GCGTATGGAG CGGGCTGCGC
CCGGCTGAGC GCGAGCGCAT CCTGCTGAGG CTCGCCGACC TGATCGAAGC CGACGCCGAG
ACGCTCGCGC AGCTCGAAAC GCTGAACCAG GGCAAGTCGA TCCACGTGTC GCGCGCGATC
GAGGTCGGCG CGAGCGTCGA ATACGTGCGC TACATGGCCG GCTGGGCGAC CAAGATCACC
GGCCAGACGC TCGACGTGTC GATCCCGTTC CCGCCCGGCG CGCGCTATAC GGCCTATACG
CGCAAGGAGC CCGTCGGCGT GGTCGCCGCG ATCGTGCCGT GGAATTTCCC GCTGATGATC
GCGGTGTGGA AGCTGATTCC GGCGCTCGCG GCCGGCTGCA CGATCGTGCT GAAGCCGTCG
CCGGAAACGC CGCTCACCGC GCTGCGCCTC GCCGAACTAG CCCGTGACGC GGGCGTGCCG
CCCGGCGCGT TCAACGTCGT CACCGGCGGG CGCACATGCG GCGCCGCGCT GTCGAGCCAC
CCGTCGATCG CGAAGATCTC GTTCACCGGC TCGACCGCGA CCGGCAAGCT GGTCGGCGCG
GCGGCCGTGC AGAACATGAC GCGCTTCTCG CTCGAACTCG GCGGCAAGAA TCCGATCGTG
ATGCTCGACG ACGTCGACGT CGCGCAGGCG CTCGACGGCG TCGCCGCCGG CGCGTTCTTC
AACCAGGGGC AGGTGTGCGC GGCCGCGTCG CGCATCTACG TGCACCGCAG CAAGTTCGCG
CAGCTCGCGG ACGGCCTCGC CGGCATCGCG CAGTCGATGA AGCTCGGCGC GGGCCTCGAC
ACGACCGCGC AAATCAACCC GCTCGTCTCG GCGCACCATC GCGACAAGGT CGTCCAGCAC
ATCGAGGGCG CGCGCCGCGC GGGCCTTACG TTCCTCGCGG GCGGCACGCC GGCCGACGAC
CTGCCCGGCT ACTACGTGAA GCCGGCCGTG ATCGCCGATC CGCATCCGGA CAGCGCGATC
GTGCGCGACG AGGTGTTCGG CCCGGTGATC GTCGTCGTGC CGTTCGACGA TGCGGCCGAC
GCGGTGCGGC TCGCGAACGC GTCGCCGTAC GGCCTCGCCG CGAGCATCTG GAGCAACGAC
CTGAAGCGCG TGATGAACCT CGTGCCGCGG ATCGAGGCCG GTACCGTGTG GGTGAACTGT
CACATTCCGC TCGATCCGTC GATGCCGTTC GGCGGCTACA AGCAGTCGGG CATCGGCCGC
GAGTTCGGCC AGTACGCGGT CGAAGGCTTC ACCGAAACCA AATCCGTCTG CATCGCGCAC
TGA
|
|---|
| Protein sequence | MSTTNFVAVS DTVRTFVARD FGLFIEGAMQ PAHSAARLDV YDPATGERLA TVADADAHDV
DRAVASAKHA FDTRVWSGLR PAERERILLR LADLIEADAE TLAQLETLNQ GKSIHVSRAI
EVGASVEYVR YMAGWATKIT GQTLDVSIPF PPGARYTAYT RKEPVGVVAA IVPWNFPLMI
AVWKLIPALA AGCTIVLKPS PETPLTALRL AELARDAGVP PGAFNVVTGG RTCGAALSSH
PSIAKISFTG STATGKLVGA AAVQNMTRFS LELGGKNPIV MLDDVDVAQA LDGVAAGAFF
NQGQVCAAAS RIYVHRSKFA QLADGLAGIA QSMKLGAGLD TTAQINPLVS AHHRDKVVQH
IEGARRAGLT FLAGGTPADD LPGYYVKPAV IADPHPDSAI VRDEVFGPVI VVVPFDDAAD
AVRLANASPY GLAASIWSND LKRVMNLVPR IEAGTVWVNC HIPLDPSMPF GGYKQSGIGR
EFGQYAVEGF TETKSVCIAH
|
|---|
| |