| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4664 |
|---|
| Symbol | |
|---|
| ID | 6179475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1780305 |
|---|
| End bp | 1781174 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641684423 |
|---|
| Product | transketolase domain-containing protein |
|---|
| Protein accession | YP_001811334 |
|---|
| Protein GI | 172063683 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3959] Transketolase, N-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAG CATTGCAGGA GAGCGATCAG GCGCTTTCCA GGGAGACTCT CGCGCAGTTG
CGCGAGAAGG CGCAATTCGT CCGCCTCGAG ACGATTCGTC TGATAGAAAT CGCGAAGACG
GGACACTACA CGTCGGTGTT TTCCGCAGCC GAAATCTTTG CTGCGCTTTA CTACGACGTC
ATGGCGCTGC GTGCCGGCAA TCCGCAATGG AAGGATCGCG ACCGGTTCAC GATGGGCAAG
GGGCACGCGG CCGTCGGACT TTTTCCCATT CTTGCGGACT ACGGTTTCAT CGACCGGGAG
ACGCTCGATG GCTACACCCG TCTCGGCAAT CCGCTCGGCG ATCATCCGGA CATGACCAAG
GTTCCGGGCA TCGATTTCAG CTCGGGGTCG ATCGGCCACG CGCTGTCGAA CGGTGCCGGC
ATGGCCAAGG CGGCGCAGAT GGCAGGCAGC CCCTTCAAGG TTTTCACGTT GCTGGGTGAC
GGCGAAATGC AGGAAGGGCA GGTATGGGAA GCCGCGCTGT TCGCCGCGCA TCACCGCCTC
TCGAACCTCA TCGCGATTGT CGATCGCAAC GGCTATCAAC TCGACGGCAA GGTCGACGAC
GTCATCGGCA TCGAATCGCT TGCGGAGAAG TGGCGCGCCT TCGGCTGGGA GACGCATGAA
GTAGACGGCC ACGATCTGAC TGCCCTCGTG CCGCTGCTGC GTCGTGTGAA GGCCGACCCG
GTGCGCAGCA AGCCGGTCTG CATCATCGCG AAGACGGTCA AGGGCAAGGG CGTGTCGTAC
ATGGAAACCG AACCCGGCTG GCATCTCGGC TATCTGGCCC CTGACGACGC GCAACGGGCG
AGCGAAGAAA TCAAGAGCAA GGTGATCTAA
|
|---|
| Protein sequence | MSTALQESDQ ALSRETLAQL REKAQFVRLE TIRLIEIAKT GHYTSVFSAA EIFAALYYDV
MALRAGNPQW KDRDRFTMGK GHAAVGLFPI LADYGFIDRE TLDGYTRLGN PLGDHPDMTK
VPGIDFSSGS IGHALSNGAG MAKAAQMAGS PFKVFTLLGD GEMQEGQVWE AALFAAHHRL
SNLIAIVDRN GYQLDGKVDD VIGIESLAEK WRAFGWETHE VDGHDLTALV PLLRRVKADP
VRSKPVCIIA KTVKGKGVSY METEPGWHLG YLAPDDAQRA SEEIKSKVI
|
|---|
| |