| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4641 |
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| Symbol | |
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| ID | 6179345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1753840 |
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| End bp | 1754616 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641684400 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001811311 |
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| Protein GI | 172063660 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4588] Accessory colonization factor AcfC, contains ABC-type periplasmic domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGG CAATCCTCAC GTTGTCGTGC GGCGCGTTAG CGCATGAAAC GCCCGATCCG
ACGATACGGC ACGATGCGCG AGACGGCATC GTGCGTTTGT ACGGCGCAGG CGGCCCGGAT
ACCGCATTCG CGAAAGTCGC GAAGGTCTTC ACTGACGAAA CGGGTATCAA GGTGGAGGTG
ACTGGCGGAC CGGAGCCGAC GTGGAGCCGA AAAGCGCAAG CCGATGCCGA TATTCTGTGG
GGGACGTCGG AAGAAGATAT GGCCGGCCTC CTCGAAACCT ACCAGGTGTT TCGATGGAGC
GACGTGACGC CGATCTATAT CCGGCCGGCC GTCATCGCCG TGAAGAAAGG CAATCCGAAA
CACATCCGCG GCTTCGACGA TCTGCTCGCG GATGGCGTGC GTATCGTCGT CACGGAAGGC
GCGGGCGCGG CGAATACGTC GGGCACGGGC ACGTGGGAGG ACATCGCCGG CCGCATGGGG
CGTCTTGACG ACGTCAGGCG GTTCAGGAAG AACATCGTCG GATCCGGCAA GGGCAGTGGG
CCGAGCTTCA GGATGTTCGT CGACAAGGAC GCGGATGCCT GGATCACGTG GCCCGACTGG
CCGATCACGC ATGCCGACAA AGCCGATTAC GTCAGCCTGC CCGCGAACAG AGCGATCTGG
AGAGACGTCA ATGTTGCGCT CGCTCCGGAT GCCGATCCTG AGGCAACGCA GTTCCTCGAT
TTCCTGAACA GCGATCGCGG AGCCGCAATC ATGAAGACCG AGGGATGGGT GCGCTGA
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| Protein sequence | MSLAILTLSC GALAHETPDP TIRHDARDGI VRLYGAGGPD TAFAKVAKVF TDETGIKVEV
TGGPEPTWSR KAQADADILW GTSEEDMAGL LETYQVFRWS DVTPIYIRPA VIAVKKGNPK
HIRGFDDLLA DGVRIVVTEG AGAANTSGTG TWEDIAGRMG RLDDVRRFRK NIVGSGKGSG
PSFRMFVDKD ADAWITWPDW PITHADKADY VSLPANRAIW RDVNVALAPD ADPEATQFLD
FLNSDRGAAI MKTEGWVR
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