| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4638 |
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| Symbol | |
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| ID | 6180756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1750760 |
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| End bp | 1751848 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641684397 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001811308 |
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| Protein GI | 172063657 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3376] High-affinity nickel permease |
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| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAA GCCATTACAT TCGTCGTTTT TCCCATCACC GGACGGCAAC CGTTTCACTG
GCCGCAGTCG CCATGTTCAT CGTAGTTCTG CACGTCGTCG GCTGGGGTAC GTTGCTTGCG
TTCATCGTTC CGCACCATCT CAGTGTCGGC TCCCGAGCCT TCGGCATCGG CGCCGGCGTG
ACGGCGTACT CGCTGGGCAT GCGGCACGCG TTTGACGCCG ACCATATCGC GGCGATCGAC
AACACCACAC GCAAACTGCT CGGTGAAGGC CAGCGGGCGT CGAGCGTGGG ATTCTGGTTC
TCGTTCGGTC ATTCGAGCGT CGTGTTCGGG CTCGCCATCT TCATCGCGCT CGGCATGCAT
TCCCTGTCTG CGCATGTACT CGACGCCGGC TCGCCGCTGC GCATGCTGAC AAGCACCGTT
GGCGCGATCG TCTCCAGCAT GTTCCTTTAT TCAATAGCGA TACTGAACAT CGCCGCGTTT
TACGATCTTT GCACGGCATT TCGGCGCATG CGGAGCGGCC GGCTCGACGA AGCGCAGCTC
GAACGATGCC TCCAATCGCG CGGCCTGATC AGCCGTTTTC TCGCGCCGCT GATGCGTATC
GTGCGCACGC CCGGCCAGAT GTACTTCGTC GGCGTCCTGT TCGGACTCGG CTTCGATACT
GCAACGGAAA TCGCCCTGCT GGTGCTGACT GGTGCGGGCG CCGCGTCGGG CCTGCCGTGG
TACGCGATTC TCTGTCTGCC CGTGCTGTTC GCCGCCGGCA TGCTGCTGTT CGACACGATC
GACGGCTCGT TCATGACGCT TGCGTACGGA TGGGCACTCG CACAACCCAT CCGCAAGATC
TACTACAACC TCGTCGTCAC CGGTCTCTCC ATCGGCTTCG CGCTCATCAT CGGAACGATC
GAGATGCTCG GCCTGCTCGG CAATGCTTTC CACACGCACC GCACGTCAGG TGCGTGGCTG
CCGGCACTCG ACCTCAACCA CATGGGGTTC GCGATCGTCG GCCTGTTCGT CGCGACATGG
GCGGTGTCCG CCGCGATATG GAAGTTCGGA CGAATCGAAC GACGCTGGGC ACGCGGTGGA
GACGCATGA
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| Protein sequence | MSASHYIRRF SHHRTATVSL AAVAMFIVVL HVVGWGTLLA FIVPHHLSVG SRAFGIGAGV
TAYSLGMRHA FDADHIAAID NTTRKLLGEG QRASSVGFWF SFGHSSVVFG LAIFIALGMH
SLSAHVLDAG SPLRMLTSTV GAIVSSMFLY SIAILNIAAF YDLCTAFRRM RSGRLDEAQL
ERCLQSRGLI SRFLAPLMRI VRTPGQMYFV GVLFGLGFDT ATEIALLVLT GAGAASGLPW
YAILCLPVLF AAGMLLFDTI DGSFMTLAYG WALAQPIRKI YYNLVVTGLS IGFALIIGTI
EMLGLLGNAF HTHRTSGAWL PALDLNHMGF AIVGLFVATW AVSAAIWKFG RIERRWARGG
DA
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