10 homologs were found in PanDaTox collection
for query gene BamMC406_4637 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010552  BamMC406_4637  hypothetical protein  100 
 
 
343 aa  699    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2690  hypothetical protein  43.73 
 
 
343 aa  275  7e-73  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.192027  normal  0.887483 
 
 
-
 
NC_010506  Swoo_2972  hypothetical protein  26.24 
 
 
358 aa  96.3  7e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6800  hypothetical protein  24.83 
 
 
484 aa  68.6  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  0.73776  normal 
 
 
-
 
NC_013131  Caci_3986  hypothetical protein  23.37 
 
 
498 aa  65.5  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0130499  normal  0.343534 
 
 
-
 
NC_008726  Mvan_5544  hypothetical protein  22.84 
 
 
338 aa  61.6  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.244919  normal 
 
 
-
 
NC_009338  Mflv_1171  hypothetical protein  27.09 
 
 
299 aa  56.2  0.0000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.286882  normal 
 
 
-
 
NC_008726  Mvan_5638  hypothetical protein  24.12 
 
 
305 aa  53.5  0.000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12228  hypothetical protein  28.95 
 
 
230 aa  47.4  0.0004  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.547457  n/a   
 
 
-
 
NC_013595  Sros_4771  hypothetical protein  25.09 
 
 
459 aa  46.6  0.0007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.186259 
 
 
-
 
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