| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4609 |
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| Symbol | |
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| ID | 6180500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1714089 |
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| End bp | 1715228 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684369 |
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| Product | patatin |
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| Protein accession | YP_001811280 |
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| Protein GI | 172063629 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.995151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAA GTCAACCCGC ACATCCGAAA CTGCCGGGCC AGGTCGTGCT CGTGCTTCAG
GGCGGCGGCG CGCTGGGGGC ATACCAGCTC GGCGTATTCG AGGCGCTGGA CGCGTCGGGC
ATTCAGCCCG ACTGGGTCAT CGGCACGTCG ATCGGCGCGA TCAACGCGGC GCTGATCGCC
GGCAACGCAC CCGGACACCG CGCGCAGCGG ATGGCCGAAT TCTGGCGCCA TGTGACCGAA
CGGCCCGCCG TGAACGTGCC GGGCTTCCCC ACCACCTGGG ACAAGATCGG CGCCGAGCTC
GCGGTCATCG GCGCCGGGAT CCCGGGATTC TTCCGGCCGA ATCCCGCCGC ATGGCTCGGG
CCGCTCGCGC GCGTCGGCGT CGAGCACGCG TCCTACTATC TGGTCGAGCC GCTGCGCGAC
ACGCTCGCGT CTCTGGTCGA TCTCGACCTG CTGAACGCGC GCCGGCCACG GCTGACCGTC
GGCGCGGTCA ACGCGTGCAC CGGCACGATG CGCTATTTCG ATTCACGCGA CCGGCCGCTC
GACCTCGACC ACGTGATGAG CTCGGGCGCG CTGCCGCCCG CGTTCCCGGC CGTGCGGGTC
GACGGCGCGC CCTACTGGGA CGGCGGCATC TATTCGAATA CGCCGGTCGA GGTCGTGCTG
GACGACGCGC CGCGCCGCAA CTCGATCATC TTCTCGGTGC AGATGTGGAA TCCGGTCGGG
CCCGAGCCGC AAAGCATCTG GCAGGTGTCG GAGCGGCAGA AGGACATCCA GTATGCGAGC
CGCACGGACA GCAACATCGC GCGGCAACAG CAGATTCACG GGCTGCGCCA CGTGATCAAG
GAACTGGTCA TGCGGCTGCC GGAGGCCGAG CGCAAGTCGC CCGACGTGCA GGCGCTCGCC
ACGTGGGGCT GCCAGACCAC GATGCACGTG ATCAAGCTCG CGGCGCCGCG CCTCGACGGC
GACGATCAGT GGAAGGACAT CGATTTCACG CCGGACGGCA TCGCGGCGCG CCGCCAGGCC
GGGTTCGACG CGACGATGCA GGCGATCGCC GCGCGCCCGT GGGAGCTGCC GCTGGACCCG
ACGGAAGGGC TCAGCGTCTG GAGTCCGGAA GAGAACAGGA TCGGCGAACG GCACAACTGA
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| Protein sequence | MTASQPAHPK LPGQVVLVLQ GGGALGAYQL GVFEALDASG IQPDWVIGTS IGAINAALIA
GNAPGHRAQR MAEFWRHVTE RPAVNVPGFP TTWDKIGAEL AVIGAGIPGF FRPNPAAWLG
PLARVGVEHA SYYLVEPLRD TLASLVDLDL LNARRPRLTV GAVNACTGTM RYFDSRDRPL
DLDHVMSSGA LPPAFPAVRV DGAPYWDGGI YSNTPVEVVL DDAPRRNSII FSVQMWNPVG
PEPQSIWQVS ERQKDIQYAS RTDSNIARQQ QIHGLRHVIK ELVMRLPEAE RKSPDVQALA
TWGCQTTMHV IKLAAPRLDG DDQWKDIDFT PDGIAARRQA GFDATMQAIA ARPWELPLDP
TEGLSVWSPE ENRIGERHN
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