Gene BamMC406_4513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4513 
Symbol 
ID6180970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1617262 
End bp1618260 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content74% 
IMG OID641684274 
Productalcohol dehydrogenase 
Protein accessionYP_001811185 
Protein GI172063534 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA TTGCCAACGC CATTCGGATC GGAATCGACC GCTACGGCGA CGCCGGGGTC 
CTGCGCCGCG TCGATGCGCG CGTCGGGCCG CCCGGCGCCG GCGAGGTGCG GATTCGCCAG
ACCGCCGTCG GCGTGAATTT CGTCGACATC TATTTCAGGA CCGGCGCGCA TCCGTTGCCG
GCGCTGCCGG ACGCGCTCGG TGTCGAGGCG GCCGGCGTAA TCGACGCGGT CGGCCCCGGC
GTGATGGCAT TCGTTCCGGG CCAGCGTGTC GCGTATGCGG GGCTGCCGAC CGGCAGCTAT
GCGAGCGTGC GCACGCTGCC CGCCGAGCGG GTGGTGCCCG TGCCCGACGG CGTGAGCGAC
GACGCGGCCG CGGCCGGGCT GCTGAAAGGG ATCACCGTCT ACATGCTGCT GCATCGCGTC
CGGCAGGTCG GCGTCGGCGA CACCGTGCTC GTGCATGCGG CGGCCGGCGG CGTCGGGCTG
CTGGCGACGC AGTGGGCCCG CGCGCTCGGC GCGCGTGTGA TCGGGACGGT CGGCTCGGCC
GCGAAGGCCG CGCTGGTGCA TGCGCATGGG GCGGAAGCGG TGGTCGACTA TCGCGAGGAG
GACTTCGTCG CGGCGGCCCG CGCGTTCGGC GGCGGCGCGG GCGTCGACTA TGCGATCGAC
GGGATCGGCG GCGACGTGCT GACGCGTACG CTCGGCGCGG TCCGGCCGTT CGGGATGGTC
GCGAGCATCG GGCAGGTTGC CGCGATCGGC GCGCGGCAGA CGATCGATCT CGACGAACTC
GGCCCGGCCC GCTCGATCGC GCTGGCGCGG CCGAGCGTGC TCGGCTTCAT CGCGCGTGAC
GTCGCCGGGT ATCGGGAAGC CGCGCGCGCG ACGCTCGAGC GGCTCGCGGA CGGGATGCAC
GTGGAGATCG GCGCGCGGCT GCCGCTAGAA CGGGCGGCCG ACGCGCATCG GTTGCTGGAG
TCGCGGCAGA CGACGGGCGC GGTGGTGCTG GTGCCGTGA
 
Protein sequence
MTQIANAIRI GIDRYGDAGV LRRVDARVGP PGAGEVRIRQ TAVGVNFVDI YFRTGAHPLP 
ALPDALGVEA AGVIDAVGPG VMAFVPGQRV AYAGLPTGSY ASVRTLPAER VVPVPDGVSD
DAAAAGLLKG ITVYMLLHRV RQVGVGDTVL VHAAAGGVGL LATQWARALG ARVIGTVGSA
AKAALVHAHG AEAVVDYREE DFVAAARAFG GGAGVDYAID GIGGDVLTRT LGAVRPFGMV
ASIGQVAAIG ARQTIDLDEL GPARSIALAR PSVLGFIARD VAGYREAARA TLERLADGMH
VEIGARLPLE RAADAHRLLE SRQTTGAVVL VP