Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4480 |
Symbol | |
ID | 6180011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1582863 |
End bp | 1583933 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684241 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001811152 |
Protein GI | 172063501 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.598069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTC CCGCCTCCTC CCTCGAAGCA CTGCGCACGC TGCCCGCGCG GCGCCCGGCC GTGCGCTGGG CGCTGCGCGT GCTGCGCTGG GCGCTCACGC TCGCCGTCAC GTTCGCGGGC CTGCTCGCGC TGACGTTCGT GATCGGCCGC AAGGTGCCGA TCGATCCCGT GCTCGCGATC CTCGGCGATC GCGCGTCGGC CGAGGCGTAC GCGGCCGAGC GCATCGCGCT CGGCCTCGAC AAGCCGCTCG TCACGCAATT CCTGATCTAC GCGCGCGACG TGCTGCACGG CAATCTCGGC ATGTCGCTGC TGACGTCGAA TCCGGTGCTC GACGACATCA GGCGCGTCTT CCCCGCCACG CTCGAACTCG CGACGATCGC GACCCTGATC GGCATCGCGC TCGGCGTGCC GCTCGGCGTC GCGGCCGCGG TGCGGCACAA CCGGCCGATC GACCACATCG CGCGCTTCGT CGGCCTGATC GGCAATTCCG TGCCGGTGTT CTGGCTCGGG CTGATGGGGC TGCTGCTGTT CTATGCGCGG CTGCACTGGG TAGGCGGCCC CGGCCGGCTC GATCCCGTGT ACGACGGCAT GGTCGACCCG CGCACCGGCA GCCTGCTGCT CGACTCGGCG CTCGCGGGCG AGTGGGACGT GTTCCGCAAC GCGGTGTCGC ACATCGCGCT GCCGGCCGCG ATCCTCGGCT ACTACTCGGT TGCGTACCTG AGCCGGATGA CGCGCTCGTT CATGCTCGAC CAGCTGAGCC AGGAATACAT CGTCACCGCG CGCGCGAAGG GCCTGTCCGA GCGCCGCGTG ATCTGGCGGC ATGCGTTCGG CAACATCGCG GTGCCGCTGC TCACCGTGAT CGCGCTCACA TACAGCAACC TGCTCGAAGG CTCGGTGCTG ACCGAGATCG TGTTCGCGTG GCCGGGGCTC GGCTCGTACC TGACGGGCGC GCTGCTGAAC GCCGACATGA ACGCGGTGCT CGGCGCGACG CTCGTGATCG GCGTGATGTT CATCACCGTC AACCTGCTGA CCGACGCGCT GTACCGCGTG TTCGATCCGC GTGCGCGCTG A
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Protein sequence | MSTPASSLEA LRTLPARRPA VRWALRVLRW ALTLAVTFAG LLALTFVIGR KVPIDPVLAI LGDRASAEAY AAERIALGLD KPLVTQFLIY ARDVLHGNLG MSLLTSNPVL DDIRRVFPAT LELATIATLI GIALGVPLGV AAAVRHNRPI DHIARFVGLI GNSVPVFWLG LMGLLLFYAR LHWVGGPGRL DPVYDGMVDP RTGSLLLDSA LAGEWDVFRN AVSHIALPAA ILGYYSVAYL SRMTRSFMLD QLSQEYIVTA RAKGLSERRV IWRHAFGNIA VPLLTVIALT YSNLLEGSVL TEIVFAWPGL GSYLTGALLN ADMNAVLGAT LVIGVMFITV NLLTDALYRV FDPRAR
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