| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4476 |
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| Symbol | |
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| ID | 6179673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1577848 |
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| End bp | 1579104 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684237 |
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| Product | oxalate decarboxylase |
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| Protein accession | YP_001811148 |
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| Protein GI | 172063497 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03404] bicupin, oxalate decarboxylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.937895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.867974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC TTTCTCGACG CAGGATGTTG ACGAGTACGG CCGGCGCGAT TGCCGCCGCG
GGCATTGCGG TAACGGCCAA GGCGGCTTCG TTCGGCAATC CGGACAGCCC GCCGGAAGGG
GCGATAAACG CGCGCAACAA GCAGGGATTG ACCGATCCGG GGCCGAAGAA TCCCGCATTG
GCGAATCAAT TCCCGTCTTT CCAGGATCCG CCGGCCACCG ATATCAACGG CATGCCGTTA
TTCTGGGCGT CATTCAATAA CGCGCATAAA CGTATTCAAA ACGGCGGATG GGCACGCGAA
GTCACGCAGG ACGATTTCGC GATTTCGGAA ACCATTTCCG GCGTGAACAT GCGATTGACG
CGCGGCGGCA TTCGCGAGAT GCATTGGCAC CAGCAGGCCG AATGGGCAAT CATGCTCGAC
GGCCGCTGCC GGATCACCGT GCTCGACGAA CTCGGACGCC CGTCGGTGCA GGACGTGAAA
ACCGGCGACC TCTGGTATTT CCCGCCCGGC CTGCCGCACT CGCTGCAGGG CATCGGCACC
GACGGCGCCG AATTCATGCT CGCCTTCGAC AACGGCCGCG CGTCCGAATT CAACACGCTG
CTGCTGACCG ACTGGGTCGC GCATACGCCG CCGGACGTGC TCGCGCTCAA CTTCGGCGTA
CCGGCCGACG CGTTCAAGAA CATTCCGCTC GACAACCTGT GGATCTTTCA GGGCGACGAG
CCGGGGCCGC TCGCGGACGC CCAGCGTGCG GCCGCGTCTT CGGCCGGTGC GCCGCCGCAT
CCGTTCATCT TCTCGCTCGG CGCGATGAAG CCGTTCAAGA AGACGCGCGG CGGCGAGGTG
CGGATCGCCG ACAGCACGAA CTTCAACGTA TCGCAAACGA TTGCGGCGGC GCTCGTCACC
GTGCATCCGG GCGGCATGCG CGAGCTGCAC TGGCATCCGA ACGCCGACGA ATGGCAGTAC
TACCTGCAGG GCGAAGCGCG GATGACCGTG TTCGACACCG GGCCGAAGGC GCAGACGGCA
GACTTCCGCG CGGGCGACGT CGGTTACGTG AAAAAGAGCC TCGGACACTA CGTGCAGAAC
ACCGGCAACT CCGATCTCGT GTTCCTCGAA ATCTTCAAGA CCGACCGCTA TGCGGAGGTG
TCGCTGTCCG ACTGGCTCGC GCACACCCCG CCGAAGCTCG TCGAGGCACA CCTGAATATC
GCGCCTGACG TGCTCGCGCG GTTTCCGCGC AATCGTCCGG ACGTCGTGCC GCTGTAA
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| Protein sequence | MTNLSRRRML TSTAGAIAAA GIAVTAKAAS FGNPDSPPEG AINARNKQGL TDPGPKNPAL
ANQFPSFQDP PATDINGMPL FWASFNNAHK RIQNGGWARE VTQDDFAISE TISGVNMRLT
RGGIREMHWH QQAEWAIMLD GRCRITVLDE LGRPSVQDVK TGDLWYFPPG LPHSLQGIGT
DGAEFMLAFD NGRASEFNTL LLTDWVAHTP PDVLALNFGV PADAFKNIPL DNLWIFQGDE
PGPLADAQRA AASSAGAPPH PFIFSLGAMK PFKKTRGGEV RIADSTNFNV SQTIAAALVT
VHPGGMRELH WHPNADEWQY YLQGEARMTV FDTGPKAQTA DFRAGDVGYV KKSLGHYVQN
TGNSDLVFLE IFKTDRYAEV SLSDWLAHTP PKLVEAHLNI APDVLARFPR NRPDVVPL
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