| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4460 |
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| Symbol | |
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| ID | 6180293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1557081 |
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| End bp | 1557956 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684221 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001811132 |
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| Protein GI | 172063481 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.220159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTGA AACTGCTGCG CACCTTCCTG ACGGTCACCG AGCTCAGCCA TTTCAGCCGC
GCGGCCGACG CGCTGCACAT GAGCCAGCCG GCGCTGAGCA AGCAGATCGG CGCGCTCGAG
GCGAGCCTCG GCGGCAAGCT GTTCGAGCGC GGCCGGCACG GCGCGGAACT GACGCCGTTC
GGCGAACGCT TCCTGCCCGA TGCGCAGGCG CTCGTGCGCG ATGCCGACGA AATCCTCGCG
CGTGCGCGGG AGGCGACCAG CGGACAACGC GGGCATCTGC GGCTTGGCAT CTGCCTGTCC
GTGCTGACGC TCGTGCCGAA ACTCGTAGCG GAATTCCGTC GCCGCAATCC GGGTATCGCG
GTCACGCTGA GCGACCTGTC GTCGTCCGAG CAAACACGCC GGCTGCGCGC CGGCAAGCTC
GACGCCGGCT TCCTGCGTTT GCCGTCCGAT GAAGGGCTGT CGTCGTTCAA GGTGATCGAC
GAGGCGCTCG CGCTCGCGGT GCCGCCGCAT CTCGGCTTCA AGCGCGTGCC GGCCGATCTC
GACGTGCTCA ACGAGATCGG CTTCATCGCG CTGCAGCGCG CGCGTGGCCC GGGGCTCGCC
GCGCAGATCG ACCGGTGGTG CGTCGAGCGG CGCTTCGTGC CGCAGGTCAC GCAGCAGGCG
GAGGACGTGC AATCGGTGCT CACGTCGGTC GCGGCCGGGG TGGGCGTCGC GTTCATTCCG
TCGGGCGCGC AGTACCTGCT GCGCGACGCG ACCGTCCTGC CGCTCGACGG CAGGGATGCG
AAATGGCGCG TCGGGCTCGC ATGGCTGTCC GAGCGCGACG ATCCGGTGAC CACGCGTTTC
GTGTCGTTCA TGCGCGCGGC GATCAAGGGC GCGTGA
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| Protein sequence | MELKLLRTFL TVTELSHFSR AADALHMSQP ALSKQIGALE ASLGGKLFER GRHGAELTPF
GERFLPDAQA LVRDADEILA RAREATSGQR GHLRLGICLS VLTLVPKLVA EFRRRNPGIA
VTLSDLSSSE QTRRLRAGKL DAGFLRLPSD EGLSSFKVID EALALAVPPH LGFKRVPADL
DVLNEIGFIA LQRARGPGLA AQIDRWCVER RFVPQVTQQA EDVQSVLTSV AAGVGVAFIP
SGAQYLLRDA TVLPLDGRDA KWRVGLAWLS ERDDPVTTRF VSFMRAAIKG A
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