Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4425 |
Symbol | |
ID | 6181141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1510422 |
End bp | 1511330 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684186 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811097 |
Protein GI | 172063446 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.488055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC TGAACCAGCT TCGCTGCTTC GTCGCCGTCG CCGAGGAACT GCATTTCGGG CGCGCGGCCA AGCGGCTGTT CATGACGCAG CCGCCGCTCA GCCGGCAGAT CCAGTTGCTC GAGCACGCGC TCGGCATCGC GCTGCTCGAG CGCAGCAGCC GGCAAGTCAG GCTGACCGCG GCCGGCGAGC GCTTTCTGCG CGATGCGCGC CACATCCTCG AGTTTTCCGC GCGGGCCGAA CAGGCCGCGC AGCGCGTCGC GCACGGCGGG GCCGGCCGCA TCACCCTCGG CTTCACGGCG GTCAGCGCGT ACCGGATGAT TCCGGTGCTG CTCGCGCATG CGGCGCACGC GCTGCCGGAC GTCGATGTCG AATTGCGCGA AATGGTGTCG ACCGTGCAGA TCGACGCGCT GGCGTCGCGC ATGCTCGATG CGGGCTTCGT GCGCCAGCGC GCCGCGCGCC ATCCGCTCGA ATACCGGCTC GTGCAGCGTG AGCCGATGCT CGTCGCGGTC GCGCAGGGCT CAGCGCTCGC CGCGTACGAA CGGATCGGGC CGGACGAGCT CGACCGCCAG CCGTTCATCG CGTATTCGCC GAACGAGGGG AAGTACTTCC ACGACATGAT CTCGGGGATG TTCGCCGGCG CCGGCCGCTT GCCGAACTAC CTGCATTACG TCGGGCAGAC GCATACGATC CTCGGCCTGG TGCGCGCGGG GCTGGGCGCC GCGCTGGTGC CGGCGTCGGC GCGCGAGCTG CATGTCGACG GCGTGGTGTT CCGGCCGCTC GCGGGCGTCG ACGTGGCGGC CGAGCTGTAT CTCGCCTGGC GCGCGGACAA CGACAATCCG GCGCTGCCGG TGTTCAACGC GATGGTCGAG CGGTTTCTGA CGGAAGGGGC GGATGGTGGC GGCGTATAG
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Protein sequence | MIELNQLRCF VAVAEELHFG RAAKRLFMTQ PPLSRQIQLL EHALGIALLE RSSRQVRLTA AGERFLRDAR HILEFSARAE QAAQRVAHGG AGRITLGFTA VSAYRMIPVL LAHAAHALPD VDVELREMVS TVQIDALASR MLDAGFVRQR AARHPLEYRL VQREPMLVAV AQGSALAAYE RIGPDELDRQ PFIAYSPNEG KYFHDMISGM FAGAGRLPNY LHYVGQTHTI LGLVRAGLGA ALVPASAREL HVDGVVFRPL AGVDVAAELY LAWRADNDNP ALPVFNAMVE RFLTEGADGG GV
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