Gene BamMC406_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4417 
Symbol 
ID6181225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1501165 
End bp1501821 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID641684178 
Producthypothetical protein 
Protein accessionYP_001811089 
Protein GI172063438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0610786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGAC GAGCCGGCCT GATCCTCGAA CTCTTCGTCA ACCTGGTGCT GCCCTGGGTC 
GCCTACCGGG TCGCGCATCC GTATTTCGGC GAAACCGGCG CGCTGTACGC GTCCGCGATT
CCGCCCATCG TCTGGTCCAT CGTCGAATTC ATCCGCTCGC GCCGCGTCGA TGCGGTGGCC
GCCGTCGTGC TGCTCGGCAT CGCGCTGTCG ATCGCCGGCA TGGCGCTCGG CGGCAGCGCG
CGCACGCTGC TGATGCGCGA ATCGCTCGCG TCCGGCACGA TCGGCGTCGT GTTCCTGCTG
TCGCTGTTCC GCGATCGCCC GCTGATCTTC TACCTCACCC GCGCGACGGT CGCCCGCGAG
ATGGCCGGTG GCGCCGCGCG TTTCGAGACG GTGTGGGCCG AGCAGCCGGG GCTGCGCCAG
ATGCTTCGGC TGATGACCTT CGTGTGGGGC GCATGCATGA CGCTGGAGAT GCTGCTGCGC
CTGTGGATGG TCGTCGCATG GCCCGTCGAG CGCGTGCTCG TCGTGTCGCC GGTCATGGGT
TACACCGTGT TCGGCACGCT GCTGCTGTGG ACTTTCTGGT ACCGGCGGCG GATGCGTGAG
CGCAACAGCG TCGACATCCC GACCCGCGAC GGCATCACCG AGATAGCCGG TCGGTGA
 
Protein sequence
MKRRAGLILE LFVNLVLPWV AYRVAHPYFG ETGALYASAI PPIVWSIVEF IRSRRVDAVA 
AVVLLGIALS IAGMALGGSA RTLLMRESLA SGTIGVVFLL SLFRDRPLIF YLTRATVARE
MAGGAARFET VWAEQPGLRQ MLRLMTFVWG ACMTLEMLLR LWMVVAWPVE RVLVVSPVMG
YTVFGTLLLW TFWYRRRMRE RNSVDIPTRD GITEIAGR