Gene BamMC406_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4406 
Symbol 
ID6180758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1487409 
End bp1488200 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID641684167 
Producthypothetical protein 
Protein accessionYP_001811078 
Protein GI172063427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.311229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACC ACGACATCGA CTTTTCATGC ACCGGCTGCG GCCGCTGCTG CCACGACCTG 
CGCATTCCGC TGACCGTCGC CGAGGCCGCT GCGTGGCTGC GGCGCGGCGG CCACGTGGAG
CTGCTGTGCG ACGCCATGCC ATGGCCCGTC GAACCGGCCG CCGACGACGC GTTCGCCGCG
TACAAGCGGG CACGTTCGTC GCCCGCGCTC AGCGGCACGC TGCCGATACG GGTGACCGCC
CTGCTCACCG CGTCGCATGC GGGGCCGTGC CCGAACCTGC GCGACGACCT GCGCTGCGGC
ATCTACGACG AACGACCGCT GGTGTGCCGG ATCTACCCGG CCGAGGTCAA TCCGTTCGTG
CCGCTGATGC CGGACGGCAA GCAGTGCCCG CCCGACGCGT GGCAGCACGC GCCGCTCGCG
CGCCACGGAA CGATCGTCGA TGTGCAAACG CGCGAGAACA TCGCGCGCTC GCGGGAAGCC
AGTGCGGCGG AGACGCCGCT GCGCGCGCGA CTGTGCGCGG CGCTCGGCAT CGACGTCGCC
GCCGTTGCAA ACGAAGGTTT CGCGATTCAT GCGCCGCCCG CCGACAGGCT GCTGCGCGAA
CTGAGCGCGC TGCCCGATCC GTACACGGCG CCGGCGGAGG TGGCCGACGA TCGCGCGACT
CCGGCGTGGA CACTGCTGAC GAATCGCACC GCGACTGCCG ACACGCTCCG CTCGGTCGGC
GCATCAAGCC TGCTCGCGAA CGACGAGGCC GGCACGCGCT GCGGCTACCT CGGCTTTCAT
CCGGCGGCCT GA
 
Protein sequence
MNHHDIDFSC TGCGRCCHDL RIPLTVAEAA AWLRRGGHVE LLCDAMPWPV EPAADDAFAA 
YKRARSSPAL SGTLPIRVTA LLTASHAGPC PNLRDDLRCG IYDERPLVCR IYPAEVNPFV
PLMPDGKQCP PDAWQHAPLA RHGTIVDVQT RENIARSREA SAAETPLRAR LCAALGIDVA
AVANEGFAIH APPADRLLRE LSALPDPYTA PAEVADDRAT PAWTLLTNRT ATADTLRSVG
ASSLLANDEA GTRCGYLGFH PAA