| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4242 |
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| Symbol | |
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| ID | 6180016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1297392 |
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| End bp | 1298513 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684011 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001810922 |
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| Protein GI | 172063271 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000756343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACACC TCATTACCGC GCTCTCGGTG GCCGTTGCCG CCGGCGCGCT GACTTCCGCG
CACGCGCAGG AGGTCGTGAC GATCGGCCAC TCGGCGCCGC TGACCGGCCC GCAGGCCGCG
AACGGCAAGG ACAATGAAAA CGGCGCGCGC CTCGCCGTCG ACGAGCTCAA CAAGGCGGGT
GTGAAAGTAG CCGGCAAGAC GGTCACGTTC AAGCTGGTGT CCGACGACGA TCAGGCCGAC
CCGAAGGCGG GTGTGCAGGT CGCGCAGAGC CTGGTCGACA AGGGCGTCGT CGCGGTGCTC
GGCCCGTACA ACTCGGGCGT CGCGATTCCC GCGTCGCGCG TGTACGCCAA TGCCGGCGTG
CCGATGCTGC CGGTCGCGTC GAACCCCGCG CTCACGCGCC AGGGCTTCAA GAACATCTTC
CGGATCGGCG CGAGCGACGA GCAGCTCGGC GGCACGATGG CGACCTTCGC AGCGAAGACG
CTGAACGCGA AGACCGCCGT GGTCATCGAC GATCGCACCG CGTACGGGCA GGGGGTCGCC
GAGCAGTTCG CGAACGTCGC GAAGGCCAAC GGGATCAAGA TCGTCGACCA GGAGTACACG
AGCTCGTCGG CGACCGATTT CCTCGGCATT CTCACCAAGA TCAAGGCCAG CAATCCCGAC
GTGATCTTCT TCGGCGGCTA TGCGGCGCAG GGCGCGCCGA TGGCGAAGCA GATGAAGCAG
CGCGGCTTGC GCGCGAAGCT GCTCGGCGGC GACGGCATCT GCTCGGCCGA CATGGGCAAG
GTCGCGGGCG AGGCCGCGTC GATCGTCTAT TGCGCGCAGG GCGGCGTCGC GCTCGAGAAA
ACCTCGGCCG GCCGCGCATT CCTGAAGAAG TACCACGACA CCTATCACAC GGAGACGCAG
GTCTACGGCG TCAACTACTA CGACGGCATG AAGCTGCTCG CCGACGCGAT GGTCAAGGCC
GGCACGACCA CCGACAAGGC GAAGCTGATC GCGCAACTGG CGAAATCGAA CTACGCGGGT
GTCGCGGGCA CCTATTCGTT CGACGAACAC GGCGACCTGA AGGGCGCGCC GACCACTGTC
TACGTGATCC GTAACGGGCT GCCCGAGCCG TACGCGAAGT AA
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| Protein sequence | MRHLITALSV AVAAGALTSA HAQEVVTIGH SAPLTGPQAA NGKDNENGAR LAVDELNKAG
VKVAGKTVTF KLVSDDDQAD PKAGVQVAQS LVDKGVVAVL GPYNSGVAIP ASRVYANAGV
PMLPVASNPA LTRQGFKNIF RIGASDEQLG GTMATFAAKT LNAKTAVVID DRTAYGQGVA
EQFANVAKAN GIKIVDQEYT SSSATDFLGI LTKIKASNPD VIFFGGYAAQ GAPMAKQMKQ
RGLRAKLLGG DGICSADMGK VAGEAASIVY CAQGGVALEK TSAGRAFLKK YHDTYHTETQ
VYGVNYYDGM KLLADAMVKA GTTTDKAKLI AQLAKSNYAG VAGTYSFDEH GDLKGAPTTV
YVIRNGLPEP YAK
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