Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4241 |
Symbol | |
ID | 6180015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1296533 |
End bp | 1297270 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684010 |
Product | regulatory protein GntR HTH |
Protein accession | YP_001810921 |
Protein GI | 172063270 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000218359 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCCG CGCGTCCCGA ATCCCTTGAA GCCGGTTTCC GGCCGCTGCA GATCTACGAG CAGGTCGCCG AGAAGATCCG CGACGAGATC CGCGCGGGGC GCTATCCGGC CGATTCGAGG CTGCCGTCCG AGCGCGAACT CGCGGCACTG TTCCAGGTCG GCCGGCCGGC GGTGCGCGAG GCGCTCGGCG CGTTGCAGAA CGAAGGGCTG GTGTTCACGA AGCGCAATTC GGGCACCTAC GTCGTGCCGG CACCGCTCGA CGTGCTCGCG CAGCGCGGCG ACACGCACAG CGTGCCGGAT GCCGACTTCA GCCCGACGTC GACGCTCGAC GTGCGGCTCA TCCTCGAGCC CGCGATCGCG CGCCTCGCGG CCGCGCATGG CCGGGCCGAT CCAATCGCCG AAGGCTATCT CGCGCAGATG GAAACCATCA CCGATGTCGA CGACCCGCGG CAGCGCGCGC TGTGGAACGA GAGCGACCGG CTGTTCCACC GGCAGCTCGC GCTGATGACC GGCGATGCGC TGATCGTGAA GATCGCGGAC GAAGTCGCGA AGACGATGGA CCAGCCGCTG TGGAAACGGT TGAAGGACGA CGGCATCTAC GACGCGGGCC GGATCCGGCT CTATGTGTCC GAGCACCGGC TGATCTACGA GGCGATCGTG TCCGGCGACG CCGACGCGGC CGCGTTCTAC GTCGAGCAGC ACATTCTCCG CGTGCGGCGC GACATCACGC CGAAGTAA
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Protein sequence | MMSARPESLE AGFRPLQIYE QVAEKIRDEI RAGRYPADSR LPSERELAAL FQVGRPAVRE ALGALQNEGL VFTKRNSGTY VVPAPLDVLA QRGDTHSVPD ADFSPTSTLD VRLILEPAIA RLAAAHGRAD PIAEGYLAQM ETITDVDDPR QRALWNESDR LFHRQLALMT GDALIVKIAD EVAKTMDQPL WKRLKDDGIY DAGRIRLYVS EHRLIYEAIV SGDADAAAFY VEQHILRVRR DITPK
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