Gene BamMC406_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4239 
Symbol 
ID6180373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1294748 
End bp1295155 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content69% 
IMG OID641684008 
Productresponse regulator receiver protein 
Protein accessionYP_001810919 
Protein GI172063268 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.04072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA GCCTGTCACC CGCCGTCGCG CTCAGGGTGT TCCTCGTCGA TCACGCCGTC 
GCCGTGCGGC AACGGATCGC GCTGCTCGTC GGCGCAATCG GCGGCGTCGT GGTCGTCGGC
GAAGCGGAGG ACGGCCAGGA CGCGTGGACG CACATCCGCA GCAGCCGCGC GGACGTCGTG
ATCGTCGACC TGCGGCTCGC GGACGGCAGC GGTCTCGAGC TGATCGGGAT GCTGTCGAAG
GCCGCGCCGC CCGTCGTCAC GATCGTGCTG ACGAACCACT CGGCGCTTGC ATTCAGAGAG
GCATGCGCGG CGGCCGGAGC CGATTATTTC TTCGACAAGA CCGCCGAATT CGACGCCGCA
TGCCGCGTCA TCGAATCCCT GGTGCGCGCT CGCGCGCACC GCCCCTGA
 
Protein sequence
MNASLSPAVA LRVFLVDHAV AVRQRIALLV GAIGGVVVVG EAEDGQDAWT HIRSSRADVV 
IVDLRLADGS GLELIGMLSK AAPPVVTIVL TNHSALAFRE ACAAAGADYF FDKTAEFDAA
CRVIESLVRA RAHRP