Gene BamMC406_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4193 
Symbol 
ID6179348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1245455 
End bp1245886 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content71% 
IMG OID641683962 
Productmembrane protein-like protein 
Protein accessionYP_001810873 
Protein GI172063222 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.194091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.36355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC TGCTCACCTA CGGCGGCCTG TTCGCCGTGT CGATGGTCGC CGCGACCCTG 
TTGCCGCTCC AGTCCGAAGC CGTGCTTGCC GGCCTGCTGC TCGCCGGGCG CGAGCCCGTG
TGGGCGCTGC TGCTCGTCGC GAGCATCGGC AACGTCGCGG GTTCGGTGAT CAACTGGGCC
CTCGGCCGCG GCATCGAGCA CTTCCGCGAC CGCCGCTGGT TTCCGATCAA GCCGGCCGCG
CTCGCGCGCG CCGAACGCTG GTACGCGCGC TACGGCCGCT GGTCATTGCT GCTGAGCTGG
GCGCCGGTGA TCGGCGATCC GCTGACGATG ATCGCCGGCG TGCTGCGCGA GCCGCTGCCG
GGCTTCCTCG CGATCGTGAC GATCGCGAAG GTCGGCCGCT ATCTGGCCGT CGCATGGCTC
GTGACGCAGT GA
 
Protein sequence
MSELLTYGGL FAVSMVAATL LPLQSEAVLA GLLLAGREPV WALLLVASIG NVAGSVINWA 
LGRGIEHFRD RRWFPIKPAA LARAERWYAR YGRWSLLLSW APVIGDPLTM IAGVLREPLP
GFLAIVTIAK VGRYLAVAWL VTQ