| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4154 |
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| Symbol | |
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| ID | 6180200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1194941 |
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| End bp | 1196263 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683923 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001810834 |
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| Protein GI | 172063183 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.233252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA GCCTTGCCGC TTCCTCGCCG CCATCGCCAC TACAGTCGTC GCTGCGCCAC
CTGCCTGCCG ACGATGCACG CGTCGCCGCG CTGCTCGAGC GTCTCGCGCC CGAACTCGCG
GCCGACGCCG CCCGCAACGA TGTCGACGGC CGCTTCCCGC ACGAGAACTT CGCGCGGCTG
CATCGCGCCG GGCTGATCGC GCAGGTCGTG CCGCGCGAGC ATGGCGGCGC GGGTGCGACG
CTCGCGCAGG CGAGCCGCAT CGTGGCCGCG GTCGCGCGCG CCGATCCGGC GACCGCGCTG
GTGCTGACGA TGACGTATCT GCAGCATCGC GCGCTCGGCC GCGCGGACAA CCGCTGGCCC
GCGCGGCTGA GGCGTACGGT GTTCGACAGT GCGGTCGACG ATGGCGCGCT GATCAACGCG
CTGCGGGTCG AGCCGGCGCT CGGGTCGCCG TCGCGCGGCG GCCTGCCCGA AACGGTTGCG
CGTCGCGACG GCGACAGCTG GCGGCTGTCC GGCCACAAGC TGTACTGCAC CGGCATTCCG
GCGCTGCGCT GGCTGGCCGT ATGGGCGCGC ACCGACGAGC CCGAGCCGCG CGTCGGCGTG
TTCCTCGTGC CGCGCGAGCG CCACGCCGGG GACGATCCGC GCATCCGCGT GATCGAAAGC
TGGAATCACC TGGGCCTGCG CGCATCGGGC AGCCACGAGG TCGTGTTCGA CGACGTGCGG
CTGCCCGCCG ATCATGCGGT GGACGTGCGT GCGCCCGATG CGTGGGCCGT GTCGGCCGCG
AGTCATGCGG ACGTCGACGC GCAGGCCGAT CAGCAGGCCT GGATGGTCGC GCTGCTCGGC
AGTCTCTACG ATGCGGTGGC GCGTGCGTCG CGCGACTGGC TGCTCGAGTT CGCGACGACG
CGCGCGCCGA GCGGACTTGG TGCGCCGCTC GCGACGCTGC CGCGCGTGCA GGAAGTCGTC
GGCGAGATCG AAGGGTGGCT GCATACGAAC CGCGTGCTGC TCGATGCGCA CATCGCACGC
ACCGATGCCG GCGATGCACC GCCGGTGACG ACGAGCGGCC TCGTCAAGCG AACCGTGACG
GAACAGGCGA TCCGTACCGT CGAGCATGCG TTGAAGCTGT CGGGCAATCA CGGGCTGAGC
CGCAGCAATC CGCTCGAACG CCACTATCGC GACGTGCTGT GCAGCCGCGT GCATACGCCG
CAGGACGACG CGATCGCGGT CGCCGCCGGA CGCACGGCGC TCGAGGCGGC GGCGCGAAGC
GCGACGCCGG ACGCGGGCGG GACGTCACGC CACGCACCGG CATCCGCTCG ACACGATGCG
TGA
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| Protein sequence | MSASLAASSP PSPLQSSLRH LPADDARVAA LLERLAPELA ADAARNDVDG RFPHENFARL
HRAGLIAQVV PREHGGAGAT LAQASRIVAA VARADPATAL VLTMTYLQHR ALGRADNRWP
ARLRRTVFDS AVDDGALINA LRVEPALGSP SRGGLPETVA RRDGDSWRLS GHKLYCTGIP
ALRWLAVWAR TDEPEPRVGV FLVPRERHAG DDPRIRVIES WNHLGLRASG SHEVVFDDVR
LPADHAVDVR APDAWAVSAA SHADVDAQAD QQAWMVALLG SLYDAVARAS RDWLLEFATT
RAPSGLGAPL ATLPRVQEVV GEIEGWLHTN RVLLDAHIAR TDAGDAPPVT TSGLVKRTVT
EQAIRTVEHA LKLSGNHGLS RSNPLERHYR DVLCSRVHTP QDDAIAVAAG RTALEAAARS
ATPDAGGTSR HAPASARHDA
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