| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4127 |
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| Symbol | |
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| ID | 6179999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1167790 |
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| End bp | 1168479 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641683897 |
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| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit |
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| Protein accession | YP_001810808 |
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| Protein GI | 172063157 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02305] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.561118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTGT CTTGCAGGAC CGCCGCGGCG CCGCCGCTGC CGGTCGCGAT CGGTACCGTC
TACGGCGCGC TGCTCAACGA GCGCGCGGCA TTCGACGCGC TCGGCGACGC CGTGCACGCG
CCGCCGTACG GCCGCCCGCC GCAGGCGCCG ATCCTGTACA TCAAGCCGGC CAACACGCAC
GCGGCGGACG GCGCGGCCGT CGTGGTGCCG GCCGGCGTCG ATGCGCTGGA GATCGGCGCG
TCGGTGGCGG TCGTATTCTC GCGGCGCGCG ACGCGCGTGC CGGCCGCGCA GGCGCTCGAC
TACGTGCACG GTTTCACGCT CGCGAGCGAC GTGTCGGTGC CGCATCCCGA TTACTACCGT
CCCGCCGTGC GCTTCAAGTG CCGCGATGGC TTTTGCCCGC TGGGTCCGGC GATCGTGCCG
GCGGCGGCGC TTGCCGACGT CGACGCGATC GCCCTGACCG TGCGGATCGA CGGCGCCACC
GCGGTGTCCG CGTCGACGGC CACGCTGATT CGCCCGGTGC GCGAACTGAT CGCCGACGTG
ACGGCCTTCA TGTCGTTCGA CGCGGGCGAC GTGCTGCTGC TCGGCGTCGC GGGCGGCGCA
CCGCGCGCCC GCGCGGGCAG CACGATCGAG ATTACAGCCG CCGGCATCGG CACGTTGCGG
CATACGCTGA TTGCGGAGGA CGCACGATGA
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| Protein sequence | MELSCRTAAA PPLPVAIGTV YGALLNERAA FDALGDAVHA PPYGRPPQAP ILYIKPANTH
AADGAAVVVP AGVDALEIGA SVAVVFSRRA TRVPAAQALD YVHGFTLASD VSVPHPDYYR
PAVRFKCRDG FCPLGPAIVP AAALADVDAI ALTVRIDGAT AVSASTATLI RPVRELIADV
TAFMSFDAGD VLLLGVAGGA PRARAGSTIE ITAAGIGTLR HTLIAEDAR
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