| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4085 |
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| Symbol | |
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| ID | 6180070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1111916 |
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| End bp | 1112641 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683855 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001810766 |
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| Protein GI | 172063115 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01831] 3-oxoacyl-(acyl-carrier-protein) reductase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGGC GAGTTCTCGT GACAGGGGCG AGTCGCGGCA TCGGCCGCGC CGTGGCGCTG
CGCGCGGCGT CCGACGGTTT CGCCGTGACC GTGCATTGCC GCACCGGCCG CGACGACGCG
GAAGCCGTGG CCGCGACGAT TCGCGCGCAG GGCGGCACGG CAGGTGTGCT GCAGTTCGAC
GTGCGCGACC GTGCGGCGTG CCGGCAGGAA CTGGAGGCCG ATGTCGAAGC GAACGGCGCG
TACTACGGGA TCGTCTGCTG CGCGGGCGTG ACGCGGGATG GCGCGTTTCC CGCGCTGTCC
GAAGAGGACT GGGACATCGT GATCGAAACC GGGCTGGACG CGTTCTACAA CGTCGTGCAT
CCGCTGACCA TGCCGATGGT GCGCCTGCGC GGCGGCGGCC GCATCGTGAC GATCGCGTCC
GTGTCGGGCG TGATGGGCAA TCGCGGCCAG GTCAACTACA GCGCGGCGAA GGCCGGGCTG
ATCGGCGCGA CCAAGGCGCT GGCGGTCGAG CTGGCGTCGC GCAGGATCAC CGTCAATTGC
GTGGCGCCCG GGCTGGTCGA CACCGGCATG CTCGACGATG TGCCGCTGGA GCACGCATTG
AAGACCGTGC CGATGGGTCG CGTCGGCCAG CCCGACGAAG TCGCCGCGGT GGTCGGTTTC
CTGATGTCGG ATGCGGCGAG CTACGTCACC CGGCAAGTGA TCGGCGTCAA CGGCGGGATG
GTGTGA
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| Protein sequence | MTRRVLVTGA SRGIGRAVAL RAASDGFAVT VHCRTGRDDA EAVAATIRAQ GGTAGVLQFD
VRDRAACRQE LEADVEANGA YYGIVCCAGV TRDGAFPALS EEDWDIVIET GLDAFYNVVH
PLTMPMVRLR GGGRIVTIAS VSGVMGNRGQ VNYSAAKAGL IGATKALAVE LASRRITVNC
VAPGLVDTGM LDDVPLEHAL KTVPMGRVGQ PDEVAAVVGF LMSDAASYVT RQVIGVNGGM
V
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