| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4039 |
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| Symbol | |
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| ID | 6181428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1057421 |
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| End bp | 1058905 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683809 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001810720 |
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| Protein GI | 172063069 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.185178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCC TCACCGACGC GCCCCGCACA CCTTTGCCGA TGACCGGCGA GCCGCTGTAC
GAACGACTCG CCGAGCATTA CCGCCGCATC ATCGCGGCCG GCACGCTGTC GCCCGGCGAC
CGGATGCCGT CGGTGCGCGG ATTCATGGCG CAGCACGGCG TGAGCCTGTC GACCGCGATC
CAGGCGTTCC GGCGGCTGGA AGATACGGGC TGGTGCGAAG CAAGGCCGCG CTCGGGCTAC
TTCGTGCGGC GGCGCGCGGC GGCCGCGCTC GATACGCTGC CGGAATGCGA TGGGCCGCCG
CTGAGCGTCG AGCCGCCATT CGCGGGGCTG CACGAACGCG TGTCGCGCGT GATCGATCGC
GCGAACGCAT CTCCCGATGC GTTGAATCTT GGCGGCGCGT CCGCGCTGGC GACGCTGTAT
CCGGCCGAGC GCCTGCAGGC GCTGGCGATC CGGCTGCTGC GGCGCAAGCC GACGCTGTTG
ACCGACGCGG GGCCGGTTGG CGGTTCGCCC GAATTCCGCC AGACGATGGC CAAGCGTGCG
CTGTCGTACG GCGTGACCGT GTCGCCGGAC GACGTGATGT CGACGAGCGG TGGCGTCGAT
GCGGTGAATC TCGCACTGCG CGCGGTGGCG CGACCCGGCG ACACGATCGC GATCGAATCG
CCGGCCTTTT TCGGCTTGAT CCAGCTGCTC GAAAGCCTCG GCCTGCGTGC GCTCGAGATT
CCGGCCAGCC CGACGACCGG GCTGTCGATC GAAGCGCTCG ACGTGGCGCT GACCGCGTAC
CCGGACATTC GGGCCGTGGT CGTCGTGCCG AACCTCCAGA ACCCGCTCGG CAGCGTGATG
CCCGACGAGC GCAAGGCCGC GCTGGTCGCG CTGTGCTCGC GCCGCGGCGT GGCCGTGATC
GAGGACGAGC CGTATCGCGA ACTCGTCGAA GCGTCGCACA CGGTGAAGCC CGTGAAGGCA
TGGGACCGCG ACGGCACGGT GATCTACTGC CCGTCGTTCA ACAAGGTGCT GGCGCCGGGG
ATGCGGCTCG GCTGGATGAG TGCGGGCCGC TGGCACGCGC GCGTGAAGAT GCTCAAGTTC
GCGCACAGCC GCCACAACGC CGCGTTACTG CAGGCCGTCG CGGCCGAATT CGTCGGCTCG
GGCGCGTTCG ATCGCCACCT GCACCGGTTT CGCGAACAGC TTCGCGCGCA GCGCGACGTG
ACGATCGATG CGATCGCGCG TCATTTTCCG GCCGGCACGC GGATGAACCG GCCGCCGGGC
GGCATGCTGC TGTGGATCGC GCTGCCGGAC GGCGTGCGTT CCGAAGCATT GTTCGATGCG
GCGCTGGCAC GTGGGGTAAG GATCGCGCCC GGCTCGATCT TCTCGAATTC CGACCGCTTC
GATGCGTATA TCCGGCTTGC CTGCACGCGG GTGTTCGACT CGGCTCACGA AGCGGCCATC
GAAACGCTCG GCCAACTGAT ACGCGACGCG GCGGCCGCTG CGTAA
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| Protein sequence | MTSLTDAPRT PLPMTGEPLY ERLAEHYRRI IAAGTLSPGD RMPSVRGFMA QHGVSLSTAI
QAFRRLEDTG WCEARPRSGY FVRRRAAAAL DTLPECDGPP LSVEPPFAGL HERVSRVIDR
ANASPDALNL GGASALATLY PAERLQALAI RLLRRKPTLL TDAGPVGGSP EFRQTMAKRA
LSYGVTVSPD DVMSTSGGVD AVNLALRAVA RPGDTIAIES PAFFGLIQLL ESLGLRALEI
PASPTTGLSI EALDVALTAY PDIRAVVVVP NLQNPLGSVM PDERKAALVA LCSRRGVAVI
EDEPYRELVE ASHTVKPVKA WDRDGTVIYC PSFNKVLAPG MRLGWMSAGR WHARVKMLKF
AHSRHNAALL QAVAAEFVGS GAFDRHLHRF REQLRAQRDV TIDAIARHFP AGTRMNRPPG
GMLLWIALPD GVRSEALFDA ALARGVRIAP GSIFSNSDRF DAYIRLACTR VFDSAHEAAI
ETLGQLIRDA AAAA
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