| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3981 |
|---|
| Symbol | |
|---|
| ID | 6181526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 983351 |
|---|
| End bp | 984250 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641683751 |
|---|
| Product | aspartyl/asparaginyl beta-hydroxylase |
|---|
| Protein accession | YP_001810662 |
|---|
| Protein GI | 172063011 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.275923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.188727 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGGG TCCTGTTGAT CGTGTTCATT GCGTGTGTGA TTCATACGCA CCGGCGCGGC
AAGGTTCGGC ACAGGTTGTT CAGGCAACTA TCCGATCACT CGACCTTCAC CGCGCCGCTG
AACTGCTTTT CATACGCGTT CTCTTCGGTG CCGACCACAC CGTTTCTCGA CCCGCGGCAC
TTTCCGGAAC TCGCGGTGCT GCAGCGCGAA TGGCGGACCT TGCGCGAGGA AGCGCTCGCG
TTGCGCGATG CGAGCCGGAT CAAGGCGTCG GGCGAGTACA ACGACATCGG CTTCAATTCG
TTCTTTCGCA ACGGCTGGAA GCGCTTCTAC CTGAAGTGGT ACGACGCGCC GCATCCGTCC
GCACAGGCAT TGTGTCCACG AACGGTCAAG ATCCTGTCGC GGATTCCGTC GATCAAGGCC
GCGATGTTCG CGCAGCTGCC GCCGGGCGGC AAGCTCGGGC TGCATCGCGA TCCGTATGCG
GGCTCGCTGC GCTATCACCT CGGGCTCGAC ACGCCGAACG ACGACGCGTG CCGGATCGTC
GTCGACGGCG AGTCGTATGC ATGGCGCGAC GGCGAGGCCG TGATGTTCGA CGAAACCTAT
CTGCACTGGG CCGAGAATCG CACCGCGCAC GATCGCGTGA TCCTGTTCTG CGACATCGAC
CGGCCGATGA AATATCGCTG GGCGCAGCGC GTCAACGGTG CGTTCGGACA GCTGCTGATG
CGCGCGGCCG CGTCGCCGAA CGAAACGGGC GACCGCACCG GCGGCCTCAA TCATGCATTC
AAGTACCTGT ATGCGATTCG CCGCGCCGGC AAGCGGCTGA AGGCGTGGAA TCGCACCGTG
TACTACGTCG TCAAGTGGGC GCTGTTCGGC GGGATCGCGG TCGCGATCTT CTGCCTCTGA
|
|---|
| Protein sequence | MRWVLLIVFI ACVIHTHRRG KVRHRLFRQL SDHSTFTAPL NCFSYAFSSV PTTPFLDPRH
FPELAVLQRE WRTLREEALA LRDASRIKAS GEYNDIGFNS FFRNGWKRFY LKWYDAPHPS
AQALCPRTVK ILSRIPSIKA AMFAQLPPGG KLGLHRDPYA GSLRYHLGLD TPNDDACRIV
VDGESYAWRD GEAVMFDETY LHWAENRTAH DRVILFCDID RPMKYRWAQR VNGAFGQLLM
RAAASPNETG DRTGGLNHAF KYLYAIRRAG KRLKAWNRTV YYVVKWALFG GIAVAIFCL
|
|---|
| |