| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3948 |
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| Symbol | |
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| ID | 6179756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 949092 |
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| End bp | 949982 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683719 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001810630 |
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| Protein GI | 172062979 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.344524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCG CATTCATCGG ACTCGGCAAC ATGGGCGGCC CCATGGCCGC CAACCTGCTC
AAGGCCGGCC ACGCGCTGAC GGTGTTCGAC CTCGACGCGC ACGCGGTCGA CGCCGCGGTG
CGCGCGGGCG GGACGGCGGC CGCGTCGCCG CGTGACGCGG CCGCACGCGC GTCGCTGGTC
ATCACGATGC TGCCGGCCGC GCAGCACGTG CGCGCGGTCT ATCTTGGCGA CGACGGCGTG
CTGGCCGGCG CGCGCGCCGG CGCCACCTTC GTCGACTGCA GCACGATCGA CCCGGACAGC
GTACGCGCGG TGGCCGACGC AGCCGCGCAG CACGACTTTC CGCTGGCCGA CGCACCGGTG
TCGGGCGGCA CCGGCGGCGC GCAGGCCGGC ACGCTGACCT TCATGGTCGG CGCGCCGGCC
GCGCTGTTCG AGCGCATCCG TCCGGTGCTG CTCGACATGG GGAAGAACGT CGTGCACTGC
GGCGGCACGG GCACCGGGCA GATCGCGAAG ATCTGCAACA ACCTGCTGCT CGGGATCTCG
ATGATGGGCG TGTCGGAAGC GATGGCGCTC GGCGCCGCGC TGGGCATCGA TCCGGCTGTG
CTGGCCGGCA TCATCAACAC GTCGACCGGC CGCTGCTGGA GCTCGGATAC GTACAACCCG
TACCCGGGCG TAAACGACGC GGCGCCCGCC GCGCGCGGCT ATGCGGGCGG CTTCGCCGCG
AACCTGATGC TGAAGGATCT CGGGCTCGCG ACCGAAGCCG CGCGCAGCGC ACGGCAGCCG
GTGTGGATGG GCGCGCTCGC GCAGCAGCTC TATCAGTCGA TGAGCCAGCA GGGGCTCGGC
GCGCTCGACT TCTCCGCGTG CGTGAAGCTG TACGAGACAA AACCCGCGTA A
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| Protein sequence | MEIAFIGLGN MGGPMAANLL KAGHALTVFD LDAHAVDAAV RAGGTAAASP RDAAARASLV
ITMLPAAQHV RAVYLGDDGV LAGARAGATF VDCSTIDPDS VRAVADAAAQ HDFPLADAPV
SGGTGGAQAG TLTFMVGAPA ALFERIRPVL LDMGKNVVHC GGTGTGQIAK ICNNLLLGIS
MMGVSEAMAL GAALGIDPAV LAGIINTSTG RCWSSDTYNP YPGVNDAAPA ARGYAGGFAA
NLMLKDLGLA TEAARSARQP VWMGALAQQL YQSMSQQGLG ALDFSACVKL YETKPA
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