Gene BamMC406_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3914 
Symbol 
ID6180830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp915597 
End bp916019 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content64% 
IMG OID641683685 
ProductNUDIX hydrolase 
Protein accessionYP_001810596 
Protein GI172062945 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.434564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAA CTCTCCTCTC CACGAAGCCG CCGGAAGGCA ATGCCGTCCC GATCAAGGAA 
CGGGCGACGA TCGTCTGCTA CCGCGATGAA CAGGTCCTGC TCGTGGCACG CGCGACGTCG
CGCTGGGCGC TGCCGGGCGG CACGATCAAG CGCGGAGAAA CGCCGCTCGA AGCCGCGCAT
CGGGAACTGC AGGAAGAGAC CGGCATCACC GGCCAGGATC TCGTCTACTC GATGCAGTTC
ACCGGGCTCG CGAAGGTGCA TCACGTGTTC TTCGCCGAAG TCGGCCCGGA CCAGACGCCG
CAAGCGAGCA ACGAGATCCA GAAGTGCAAG TGGTTTCGCA TCGACAGCGT CGACGGCGTG
CGCGCGAGCA TTCCGACGAA GCGCATCGTC GAGCTCGTCT ACCGGCACGA ACTCCTCAAG
TAG
 
Protein sequence
MPQTLLSTKP PEGNAVPIKE RATIVCYRDE QVLLVARATS RWALPGGTIK RGETPLEAAH 
RELQEETGIT GQDLVYSMQF TGLAKVHHVF FAEVGPDQTP QASNEIQKCK WFRIDSVDGV
RASIPTKRIV ELVYRHELLK