Gene BamMC406_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3902 
Symbol 
ID6180361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp906548 
End bp907099 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content55% 
IMG OID641683674 
Producthypothetical protein 
Protein accessionYP_001810585 
Protein GI172062934 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.788531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAC CTGCCGAGCT TGCCGAAAAA TTCTTCGGCA TACCCTATGA ATCGTTGGAC 
GAGCGCACGA AAAATGTTGC ACGCCTCATC GCGGAACGAA AGCACATAGC GAGAGACTCC
ACGCAAACGC TCGATGCAAC GGCAACGCGC GGCCAGCGCG CAGCGGATGC CGTTGCGGCC
TTCGGTGGGT CGTGGATATT CATCACGTGC TTTATTGTGG TCATGGTCGT CTGGGTCAGC
CTGAATTCGC TGATTCTGGC AACGTACAGC AAGGCCTTCG ACCCTTACCC GTATATCCTG
CTCAACCTGT TTCTGTCGAT GCTGGCAGCA ATCCAGGCGC CCATCATCCT GATGGCCCAG
AACCGGCAGT CATACAAGGA TCGGGTGTCG GCCGAACACG ATTATGAAAT CAATCTGAAG
GCCGAACTCG AGATCATGTT GCTCCATGAG AAATTGGACG GGTTGCGCGA GGAGCAATGG
ACTGAATTGC TGAACATGCA GAAGGAACAG CTGGCTGCGC TGAAGAACCT GCTCGAACCT
GGCAGGACGT GA
 
Protein sequence
MHKPAELAEK FFGIPYESLD ERTKNVARLI AERKHIARDS TQTLDATATR GQRAADAVAA 
FGGSWIFITC FIVVMVVWVS LNSLILATYS KAFDPYPYIL LNLFLSMLAA IQAPIILMAQ
NRQSYKDRVS AEHDYEINLK AELEIMLLHE KLDGLREEQW TELLNMQKEQ LAALKNLLEP
GRT