| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3816 |
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| Symbol | |
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| ID | 6180129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 806030 |
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| End bp | 807505 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683587 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001810499 |
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| Protein GI | 172062848 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.524764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.933625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATGCG CCGCCGCGCC GCTCAATTCC GCGACGCCGT GCGTCGCTCG TCAGCCGAGC
CTCATCTTGT CCGAATTCGC TTCCCCCGCC GGCGCCCGGG AGCCGGCCGT CAACTGGCGC
GCGATGTCCG CCGTGCTGCT GGCCGTCGCG CTCGCGACGC TCGACACCGC GATCGCGAAC
ACCGCGCTAC CCGCGATCGC CGCCGACCTG CACGCGTCGC CGGCCGCATC GGTGTGGATC
ATCAACGCCT ACCAGCTCGC GATGGTCGCG ACGCTGCTCC CGTTCGCATC GCTCGGCGAC
ATCGTCGGTC ACAAGCGCGT GTATGTCGCG GGCCTCGCGG TGTTTACGCT CGCGTCGCTC
GGCTGCTCGC TCGCGTCGAC GCTGCCCCAG CTGACGGCGG CGCGGATCGT GCAGGGCTTC
GGCGCGAGCG CGATCATGAG CGTGAACGTC GCGCTGATCC GCAACCTGTT TCCCGCGCAC
CGGCTCGGGC GCGGCGTCGG CTTCAACGCG CTCGTCGTCG GCGTGTCGTT CGCGGTGGGG
CCGACGATCG CGTCGTTGAT CCTGTCGGTG GCCGCATGGC CGTGGCTGTT CGCGGTGAAC
GTGCCGCTCG GCGTGCTGGC GCTTGCCGTG GCGATTCCGT CGCTGCCGCA GTCGGCGCGC
GGCAAGCATG TGTTCGATCC GCTCGCCGCG CTGTTCAACG TGATCACGTT CGCGTCGCTG
ATCTTCGCGC TCGGCGAGTT CGCGCAGCGC GGGCCGCTGT CCGTCGTGGT CGCGGCGGCC
GCGGTCGCGC TCACGTTCGG CTGGCTGCTG ATCCGCCGTC AGGCCGGGCA TCCGGCGCCG
ATGCTGCCGG TCGACCTGTT CCGCCGGCCG GTGTTCACGC TGTCCGCGCT GACGGCCGTC
TGCGCGTTTG CCGCGCAGGG GCTCGCGTTC GTATCGCTGC CGTTCTACTT CGAAACCGTC
CTGCATCGCA GCGCGGTGGA GACCGGCTTC CTGATGACGC CGTGGTCGGC GGTCGTCGCG
CTCGCCGCGC CGATCGCGGG CCGGCTGTCC GATCGTTATC CGCCCGGATT GCTCGGCGCG
ATCGGGCTCG CGCTGCTGAG CGCGGGGATG GTCGCGCTCG CCGCGCTGCC GAGCGCGCCG
AACGTCTTCG ACATCGGCTG GCGGATGATG CTGTGCGGCG CGGGCTTCGG CTTCTTCCAG
TCGCCGAACC TGAAGGCGCT GATGTCGAGC GCGCCGCCCG AGCGCAGCGG CGGCGCGAGC
GGGATCATCG CGACCGCGCG GCTGATCGGG CAGGCGACGG GCGCGGCGCT CGTCGCGCTG
TCGTTCGGCA TCGCGGGGCG TCACGGGCCG ACGCTCGCGC TGATGCTCGG TGCGGGTTTC
GCAGGCGCTG CGAGCGTCGC GAGTGGGTTG CGGCTCTTCG CGCCGTCGCA TCGGGCCGGC
GCGCCGGTGC CGGTGAAGGA GCGGGCGACG GAGTAG
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| Protein sequence | MACAAAPLNS ATPCVARQPS LILSEFASPA GAREPAVNWR AMSAVLLAVA LATLDTAIAN
TALPAIAADL HASPAASVWI INAYQLAMVA TLLPFASLGD IVGHKRVYVA GLAVFTLASL
GCSLASTLPQ LTAARIVQGF GASAIMSVNV ALIRNLFPAH RLGRGVGFNA LVVGVSFAVG
PTIASLILSV AAWPWLFAVN VPLGVLALAV AIPSLPQSAR GKHVFDPLAA LFNVITFASL
IFALGEFAQR GPLSVVVAAA AVALTFGWLL IRRQAGHPAP MLPVDLFRRP VFTLSALTAV
CAFAAQGLAF VSLPFYFETV LHRSAVETGF LMTPWSAVVA LAAPIAGRLS DRYPPGLLGA
IGLALLSAGM VALAALPSAP NVFDIGWRMM LCGAGFGFFQ SPNLKALMSS APPERSGGAS
GIIATARLIG QATGAALVAL SFGIAGRHGP TLALMLGAGF AGAASVASGL RLFAPSHRAG
APVPVKERAT E
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