| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3813 |
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| Symbol | |
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| ID | 6180398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 802597 |
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| End bp | 803643 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641683584 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001810496 |
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| Protein GI | 172062845 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.109737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGAG CAAGCTCTAC CGCACGTCGC ACCGCGCTCG CACTGGCACT GGCTGTCGTC
GGCGCATCGG CCACGGCGGC CGAACTCACG GTCGTCAACT TCGGCGGCGC GAACGGCGAC
GCGCAGAAGG CCGCATTCAA CCAGCCGTTC GAGAAGGCGA CCGGCAACAA GGTCACGGCC
GTCGAGTACA ACGGCGAGCA GGCGAAAGTG AAGGCGATGG TCGAGGCGAA GCACGTCAAC
TGGGACGTGG TCGAAGTCGA ATCGGGCGAC CTGAACCGCG GCTGCGACGA AGGGCTGTAC
GAGAAGCTCG ACTGGTCGAA GATCGCGAAG AAGTCCGACC TGATCCCGGA AGCGCCGCAG
GTGTGCGGCG TCGGCTTCTT CGTGTGGTCG ACCGCGCTGT CCTACAACGC GGACAAGCTG
AAGTCCGCGC CGACCGGCTG GGCCGATTTC TGGAACGTGA AGAAATTCCC GGGCAAGCGC
GGGATGCGCA AGGGTGCGCG CTACAACCTC GAGTTCGCGC TGATGGCCGA CGGCGTCCCG
ACGAAGGACG TGTACAAGGT GCTTGGCACG AAGGCCGGCC AGGACCGCGC GTTCAAGAAG
CTCGACGAGC TGAAGCCGTA CATCCAGTGG TGGGAAGCCG GCGCGCAGCC GCCGCAGTTC
CTGGTGGCCG GCGACGTCGT GATGTCGACC GCGTACAACG GCCGCATCGA TGCCGCGCAG
AAGGAAGGCA AGAACCTGAA GGTCGTGTGG AACGGCAGCA TCTACGACCT CGACTACTGG
GCGATTCCGA AGGGCTCGCC GAACAAGGCG CTGGCCGAGA AGTACATCGC GTACACGCTC
ACGCCGAAGC CGCAGCAAGG GTATGCGCAG CACATCGCGT ACGGGCCGAC GAATGTCGCG
GCGATCAAGT CGCTCGACGC GAAGACGCTC GCGAACCTGC CGAACTCGCC GGCCAACGGC
AAGAACGCGG TGCTGGAGGA CATCGGCTTC TGGACCGACC ACAGCGACGA GCTCGAGCAG
CGCTTCAGCG CGTGGGCCAC GAAGTAA
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| Protein sequence | MNGASSTARR TALALALAVV GASATAAELT VVNFGGANGD AQKAAFNQPF EKATGNKVTA
VEYNGEQAKV KAMVEAKHVN WDVVEVESGD LNRGCDEGLY EKLDWSKIAK KSDLIPEAPQ
VCGVGFFVWS TALSYNADKL KSAPTGWADF WNVKKFPGKR GMRKGARYNL EFALMADGVP
TKDVYKVLGT KAGQDRAFKK LDELKPYIQW WEAGAQPPQF LVAGDVVMST AYNGRIDAAQ
KEGKNLKVVW NGSIYDLDYW AIPKGSPNKA LAEKYIAYTL TPKPQQGYAQ HIAYGPTNVA
AIKSLDAKTL ANLPNSPANG KNAVLEDIGF WTDHSDELEQ RFSAWATK
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