| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3701 |
|---|
| Symbol | |
|---|
| ID | 6180899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 664349 |
|---|
| End bp | 665155 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641683471 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810384 |
|---|
| Protein GI | 172062733 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.556769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAA AGCGAGATTT TCGACGTGCG CTGGTGGCGG TGTGCATCGG CATGGCGGCT
GCGGCCGACG CGACGGCGGC TGCGTCCGAT TTAACGAAAT CGGTGCACGT CGAGTCCTAC
CGGCCGATCT ACACGAACGA CTGGCGAAGC GGAATCGGCG ACCTCGAATT CCAGGAGGCC
CGGCGCTCGG ACATCACGTG GGTGGCGGAT CCCGCGGATC CCGCACGTCG GTCGATTCGC
GTGCAGATTC AAAAGAGCGA GAATTTCGCG TACCTGATCA ATGGATTGCC GCGCGCGGAA
TTCACGTTGC CCCGCGAGAT CGTCTTCTCT CCCGGGCACG ATTATCTGAT TTGGTGGCGC
ACCTATCTGC CGCGAGATTT TGCGTTCGAT CGTCAGCAAA TGGAGATCAT CACGCAGATT
CACCAGAGCG GCTTGACGGG GTCGCCGCCG TTCATGCTGA CGCTGCTTGG CAATGAGTAC
ACGTTCTCCG TCCGCGGCGG GACCAATACC GTTCATGGAT ATGGCGGGAG TCTTTGCTGC
GCATCCGACG ACCGCGGGAA ATGGGTCGAC TGGGTACTCC AGTACACGCC CGACGCAAGC
GGCGAGCATG CGATCACGCA CCTGTGGAAA AACGGCACGA GCGTGTTCGA GGGGAGCGGA
AAGCCGAATG CGTATCCCGG CGACGTGAAC GCCTATCTGA AATTCGGGGT ATATAAACCA
GGCTGGCAGA CAGACCCGTC GGATATCGAC GCCATAACGC TGTACTTCGG CAAGGTCGCG
GTGGGCGACA GGAAGGCCAG GCAATGA
|
|---|
| Protein sequence | MNAKRDFRRA LVAVCIGMAA AADATAAASD LTKSVHVESY RPIYTNDWRS GIGDLEFQEA
RRSDITWVAD PADPARRSIR VQIQKSENFA YLINGLPRAE FTLPREIVFS PGHDYLIWWR
TYLPRDFAFD RQQMEIITQI HQSGLTGSPP FMLTLLGNEY TFSVRGGTNT VHGYGGSLCC
ASDDRGKWVD WVLQYTPDAS GEHAITHLWK NGTSVFEGSG KPNAYPGDVN AYLKFGVYKP
GWQTDPSDID AITLYFGKVA VGDRKARQ
|
|---|
| |