Gene BamMC406_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3610 
Symbol 
ID6179675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp550592 
End bp551026 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID641683380 
Productcupin 2 domain-containing protein 
Protein accessionYP_001810293 
Protein GI172062642 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC CGACCACCAC CGCCTTTTCC CACGTGAAGC CGCAGGACAC CGCGTATCGG 
GGCGACGGCC TGCGCGACTT CTTCCTGTAT CGCGATCTCG GCATCGCGGC CGCGACGAAC
GGCAAAGTCG TCGCTCAACT CGTCCGCGCG AATCATGCAC CGGCGGCGGG CACCGGCTGG
CACCGTCACG AGGCCGAGTT CCATATCGTG ATCATGCTGA AGGGCTGGGC GCGCTTCATG
TACGGCGAAC AGGAAACACT GGTTGCCGCC GGCGACTGCG TGCATCAGGC GCCGGGGATC
GTCCACTACC TGTTCGACTA CTCGCCGGAC ATGGAGTATC TGGAGATCGT CGGGCCCGCC
GATTTCAAGT CGATCGATGT CGAAGGGCCT TGCGCCGTGC CGCCGCCGAC GCCGTGGGGC
GAGACGGGCG CGTAG
 
Protein sequence
MSTPTTTAFS HVKPQDTAYR GDGLRDFFLY RDLGIAAATN GKVVAQLVRA NHAPAAGTGW 
HRHEAEFHIV IMLKGWARFM YGEQETLVAA GDCVHQAPGI VHYLFDYSPD MEYLEIVGPA
DFKSIDVEGP CAVPPPTPWG ETGA