Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3610 |
Symbol | |
ID | 6179675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 550592 |
End bp | 551026 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683380 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001810293 |
Protein GI | 172062642 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAC CGACCACCAC CGCCTTTTCC CACGTGAAGC CGCAGGACAC CGCGTATCGG GGCGACGGCC TGCGCGACTT CTTCCTGTAT CGCGATCTCG GCATCGCGGC CGCGACGAAC GGCAAAGTCG TCGCTCAACT CGTCCGCGCG AATCATGCAC CGGCGGCGGG CACCGGCTGG CACCGTCACG AGGCCGAGTT CCATATCGTG ATCATGCTGA AGGGCTGGGC GCGCTTCATG TACGGCGAAC AGGAAACACT GGTTGCCGCC GGCGACTGCG TGCATCAGGC GCCGGGGATC GTCCACTACC TGTTCGACTA CTCGCCGGAC ATGGAGTATC TGGAGATCGT CGGGCCCGCC GATTTCAAGT CGATCGATGT CGAAGGGCCT TGCGCCGTGC CGCCGCCGAC GCCGTGGGGC GAGACGGGCG CGTAG
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Protein sequence | MSTPTTTAFS HVKPQDTAYR GDGLRDFFLY RDLGIAAATN GKVVAQLVRA NHAPAAGTGW HRHEAEFHIV IMLKGWARFM YGEQETLVAA GDCVHQAPGI VHYLFDYSPD MEYLEIVGPA DFKSIDVEGP CAVPPPTPWG ETGA
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