| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3599 |
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| Symbol | |
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| ID | 6179935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 540175 |
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| End bp | 541710 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683369 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001810282 |
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| Protein GI | 172062631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.872031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC TTCCGAATTC CGACCCATCC GGTTCGCCCG CGAACCCACC CAAGCTTCAT
CGCGCGCTGA AGGCGCGCCA TCTGACGATG ATCGCCATCG GCGGCTCGAT CGGCACGGGC
CTGTTCGTCG CGTCCGGCGC GTCGATTTCG CAGGCCGGCC CCGGCGGCGC GATGGTCGCG
TACATGCTGA TCGGCCTGAT GGTCTACTTC CTGATGACGA GCCTCGGCGA AATGGCCGCG
TTCATGCCGG TGTCGGGCTC GTTCGCGACC TATGGCGCGA AATACGTCGA CGAAGGCTTC
GGCTTCGCGC TCGGCTGGAA CTACTGGTAC AACTGGGCCG TGACGATCGC GGTCGAACTC
GTCGCCGCGC AGCTCGTGAT GCACTACTGG TTCCCGGACG TGCCGGGTGT CTGGTGGAGC
GCCGCGTTCC TCGCCGTGAT GTTCCTGCTC AACGCGCTGA CCGTTCGCGG CTTCGGCGAA
GCCGAATACT GGTTCGCGCT GATCAAGGTC GTCACGGTGG TCGCGTTCAT CGGCGTCGGC
CTGCTGATGA TCTTCGGCAT TCTGAAGGGC GCGCCGGGCA ACGGCTGGGG CAACCTGACG
ATCGGCGACG CGCCGTTCGC GGGCGGCCTG CCGGCGCTGA TGGGCGTCGC GATGATCGCG
GGCTTCTCGT TCCAGGGCAC CGAGCTGATC GGCGTCGCGG CCGGCGAATC GGAGAACCCC
CGCACGACGA TCCCGCGCGC GGTGCGCCAG GTGTTCTGGC GGATCCTGCT GTTCTACGTG
CTCGCGATCT TCGTGATCGG CGTGCTGATT CCGTACACCG ACCCGAGCCT GCTGAAGAGC
GACGTGACCG ACATCGGCGT GAGCCCGTTC ACGCTGGTGT TCCGCCACGC GGGCCTCGCG
TTCGCGGCCG GCGTGATGAA CGCGGTGATC CTGACGGCCG TGCTGTCGGC CGGCAACTCG
GGCATGTACG CGTCGACGCG GATGCTCTAC AACCTCGCGA CGGAAGGCCG TGCGCCGAAG
CTGTTCGCGA AGCTGTCGCC GGGCGGCGTG CCGCGCAATG CGCTGTACGC GACGACGGCC
GTCGGCGCGC TGTGTTTCTT CACGTCGCTG TACGGCGACA AGACGGTGTA CCTGTGGTTG
CTGAACACGT CGGGCATGAC CGGTTTCATC GCGTGGCTCG GCATCGCGAT CAGCCACTAC
CGGTTCCGCA AGGGCTACGT GAAGCAGGGC TACGCGGTCG ATCAGCTGCC GTACCAGTCG
AAGTGGTTCC CGTTCGGCCC GCTGTTCGCG TTCGTGCTGT GTCTCGTGAT CGCGCTGGGA
CAGGACTATC AGGCGTTCCT CGCGAACCGG ATCGACTGGG CGGGCGTGGC CGCGACCTAC
GTCGGCATCC CGCTGTTCCT CGTCGTCTGG CTCGGCTACC GGTTCCTGAA CAAGAGCCGC
TTCGTGCGCT ACGAAGATAT GGAAATCGCG CCGTGGGTGG CCGCGAACCG CGGCGCACAG
ACGCAGCGCG TGGCGAACCG CGAAACCGCG GGTTGA
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| Protein sequence | MSALPNSDPS GSPANPPKLH RALKARHLTM IAIGGSIGTG LFVASGASIS QAGPGGAMVA
YMLIGLMVYF LMTSLGEMAA FMPVSGSFAT YGAKYVDEGF GFALGWNYWY NWAVTIAVEL
VAAQLVMHYW FPDVPGVWWS AAFLAVMFLL NALTVRGFGE AEYWFALIKV VTVVAFIGVG
LLMIFGILKG APGNGWGNLT IGDAPFAGGL PALMGVAMIA GFSFQGTELI GVAAGESENP
RTTIPRAVRQ VFWRILLFYV LAIFVIGVLI PYTDPSLLKS DVTDIGVSPF TLVFRHAGLA
FAAGVMNAVI LTAVLSAGNS GMYASTRMLY NLATEGRAPK LFAKLSPGGV PRNALYATTA
VGALCFFTSL YGDKTVYLWL LNTSGMTGFI AWLGIAISHY RFRKGYVKQG YAVDQLPYQS
KWFPFGPLFA FVLCLVIALG QDYQAFLANR IDWAGVAATY VGIPLFLVVW LGYRFLNKSR
FVRYEDMEIA PWVAANRGAQ TQRVANRETA G
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