Gene BamMC406_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3566 
Symbol 
ID6180175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp502441 
End bp502839 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content71% 
IMG OID641683335 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001810249 
Protein GI172062598 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.199431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00916142 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAC AGGACAGGGA ACAGGGCAAG GCGCGCCGCG CCGAAGTCAT GGGCGACGCA 
TTCGTCGAGC GCGCGATGCG CGACCTCGAC GGATTTTCGC GTCCGCTGCA GAACTGGCTG
AACGAGCACG CATGGGGCAG CACCTGGCAG CGCGGCGGCA TCGACCTGAA GACGCGCAGC
CTCTGCACGT GCGCGATGCT GGCGGCGCTG GGGCGCAGCG CGGAGCTGAA GGGCCACGTG
CGGGGCGCGC TCAACAACGG CGCGAGCCTC GTCGAGATCC GCGAGGTGCT GCTGCACAGC
GCGCTGTACG CGGGCGCGCC GGCCGCGGTC GAAGCGTTCC GCAGCGCACG CGAGGTGATC
GCGGAACTCG GCCTGTCGCT GCCCGACGAC GAAGCGTGA
 
Protein sequence
MSEQDREQGK ARRAEVMGDA FVERAMRDLD GFSRPLQNWL NEHAWGSTWQ RGGIDLKTRS 
LCTCAMLAAL GRSAELKGHV RGALNNGASL VEIREVLLHS ALYAGAPAAV EAFRSAREVI
AELGLSLPDD EA