Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3566 |
Symbol | |
ID | 6180175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 502441 |
End bp | 502839 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641683335 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001810249 |
Protein GI | 172062598 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.199431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00916142 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAC AGGACAGGGA ACAGGGCAAG GCGCGCCGCG CCGAAGTCAT GGGCGACGCA TTCGTCGAGC GCGCGATGCG CGACCTCGAC GGATTTTCGC GTCCGCTGCA GAACTGGCTG AACGAGCACG CATGGGGCAG CACCTGGCAG CGCGGCGGCA TCGACCTGAA GACGCGCAGC CTCTGCACGT GCGCGATGCT GGCGGCGCTG GGGCGCAGCG CGGAGCTGAA GGGCCACGTG CGGGGCGCGC TCAACAACGG CGCGAGCCTC GTCGAGATCC GCGAGGTGCT GCTGCACAGC GCGCTGTACG CGGGCGCGCC GGCCGCGGTC GAAGCGTTCC GCAGCGCACG CGAGGTGATC GCGGAACTCG GCCTGTCGCT GCCCGACGAC GAAGCGTGA
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Protein sequence | MSEQDREQGK ARRAEVMGDA FVERAMRDLD GFSRPLQNWL NEHAWGSTWQ RGGIDLKTRS LCTCAMLAAL GRSAELKGHV RGALNNGASL VEIREVLLHS ALYAGAPAAV EAFRSAREVI AELGLSLPDD EA
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